Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.46□□□□□ -0.26
Scaf4Q6PFF0 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Scaf4Q6PFF0 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.46□□□□□ -0.26
Scaf4Q6PFF0 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Scaf4Q6PFF0 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scaf4Q6PFF0 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Scaf4Q6PFF0 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.45□□□□□ -0.26
Scaf4Q6PFF0 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scaf4Q6PFF0 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Scaf4Q6PFF0 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scaf4Q6PFF0 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scaf4Q6PFF0 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.45□□□□□ -0.26
Scaf4Q6PFF0 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.45□□□□□ -0.26
Scaf4Q6PFF0 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scaf4Q6PFF0 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Scaf4Q6PFF0 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Scaf4Q6PFF0 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scaf4Q6PFF0 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scaf4Q6PFF0 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scaf4Q6PFF0 Gm11745-201ENSMUST00000121669 448 ntBASIC13.45□□□□□ -0.26
Scaf4Q6PFF0 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.45□□□□□ -0.26
Scaf4Q6PFF0 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Scaf4Q6PFF0 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scaf4Q6PFF0 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.45□□□□□ -0.26
Scaf4Q6PFF0 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.45□□□□□ -0.26
Scaf4Q6PFF0 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Scaf4Q6PFF0 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.45□□□□□ -0.26
Scaf4Q6PFF0 Gm18049-201ENSMUST00000208909 581 ntBASIC13.45□□□□□ -0.26
Scaf4Q6PFF0 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.45□□□□□ -0.26
Scaf4Q6PFF0 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.45□□□□□ -0.26
Scaf4Q6PFF0 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.45□□□□□ -0.26
Scaf4Q6PFF0 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scaf4Q6PFF0 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scaf4Q6PFF0 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Scaf4Q6PFF0 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scaf4Q6PFF0 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scaf4Q6PFF0 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Scaf4Q6PFF0 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scaf4Q6PFF0 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scaf4Q6PFF0 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Scaf4Q6PFF0 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scaf4Q6PFF0 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.45□□□□□ -0.26
Scaf4Q6PFF0 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scaf4Q6PFF0 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Scaf4Q6PFF0 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Scaf4Q6PFF0 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Scaf4Q6PFF0 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Scaf4Q6PFF0 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Scaf4Q6PFF0 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.45□□□□□ -0.26
Scaf4Q6PFF0 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Scaf4Q6PFF0 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scaf4Q6PFF0 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Scaf4Q6PFF0 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scaf4Q6PFF0 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scaf4Q6PFF0 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scaf4Q6PFF0 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Scaf4Q6PFF0 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scaf4Q6PFF0 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Scaf4Q6PFF0 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scaf4Q6PFF0 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.44□□□□□ -0.26
Scaf4Q6PFF0 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Scaf4Q6PFF0 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.44□□□□□ -0.26
Scaf4Q6PFF0 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.44□□□□□ -0.26
Scaf4Q6PFF0 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scaf4Q6PFF0 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.44□□□□□ -0.26
Scaf4Q6PFF0 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scaf4Q6PFF0 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.44□□□□□ -0.26
Scaf4Q6PFF0 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.44□□□□□ -0.26
Scaf4Q6PFF0 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scaf4Q6PFF0 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scaf4Q6PFF0 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Scaf4Q6PFF0 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scaf4Q6PFF0 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.44□□□□□ -0.26
Scaf4Q6PFF0 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Scaf4Q6PFF0 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Scaf4Q6PFF0 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Scaf4Q6PFF0 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Scaf4Q6PFF0 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scaf4Q6PFF0 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scaf4Q6PFF0 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Scaf4Q6PFF0 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Scaf4Q6PFF0 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Scaf4Q6PFF0 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Scaf4Q6PFF0 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scaf4Q6PFF0 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scaf4Q6PFF0 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scaf4Q6PFF0 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scaf4Q6PFF0 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Scaf4Q6PFF0 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scaf4Q6PFF0 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.43□□□□□ -0.26
Scaf4Q6PFF0 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scaf4Q6PFF0 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scaf4Q6PFF0 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scaf4Q6PFF0 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Scaf4Q6PFF0 Gm12260-201ENSMUST00000122447 411 ntBASIC13.43□□□□□ -0.26
Scaf4Q6PFF0 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Scaf4Q6PFF0 Rprl2-201ENSMUST00000157150 290 ntBASIC13.43□□□□□ -0.26
Scaf4Q6PFF0 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Scaf4Q6PFF0 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scaf4Q6PFF0 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms