Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf220Q6PDX6 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf220Q6PDX6 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf220Q6PDX6 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf220Q6PDX6 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf220Q6PDX6 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf220Q6PDX6 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf220Q6PDX6 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf220Q6PDX6 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf220Q6PDX6 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf220Q6PDX6 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf220Q6PDX6 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf220Q6PDX6 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Rnf220Q6PDX6 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.92□□□□□ -0.34
Rnf220Q6PDX6 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Rnf220Q6PDX6 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf220Q6PDX6 Mir5126-201ENSMUST00000175513 77 ntBASIC12.92□□□□□ -0.34
Rnf220Q6PDX6 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf220Q6PDX6 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC12.92□□□□□ -0.34
Rnf220Q6PDX6 Gm5864-201ENSMUST00000202263 970 ntBASIC12.92□□□□□ -0.34
Rnf220Q6PDX6 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.92□□□□□ -0.34
Rnf220Q6PDX6 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.92□□□□□ -0.34
Rnf220Q6PDX6 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf220Q6PDX6 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Rnf220Q6PDX6 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Rnf220Q6PDX6 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf220Q6PDX6 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf220Q6PDX6 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Rnf220Q6PDX6 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf220Q6PDX6 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf220Q6PDX6 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Rnf220Q6PDX6 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Rnf220Q6PDX6 Gm10819-201ENSMUST00000099988 561 ntBASIC12.92□□□□□ -0.34
Rnf220Q6PDX6 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Rnf220Q6PDX6 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf220Q6PDX6 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf220Q6PDX6 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Rnf220Q6PDX6 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf220Q6PDX6 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf220Q6PDX6 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Rnf220Q6PDX6 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf220Q6PDX6 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf220Q6PDX6 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf220Q6PDX6 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf220Q6PDX6 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf220Q6PDX6 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf220Q6PDX6 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf220Q6PDX6 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Rnf220Q6PDX6 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf220Q6PDX6 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Rnf220Q6PDX6 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf220Q6PDX6 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf220Q6PDX6 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf220Q6PDX6 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.91□□□□□ -0.34
Rnf220Q6PDX6 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf220Q6PDX6 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf220Q6PDX6 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.91□□□□□ -0.34
Rnf220Q6PDX6 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf220Q6PDX6 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.91□□□□□ -0.34
Rnf220Q6PDX6 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf220Q6PDX6 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Rnf220Q6PDX6 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf220Q6PDX6 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf220Q6PDX6 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf220Q6PDX6 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf220Q6PDX6 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf220Q6PDX6 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf220Q6PDX6 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf220Q6PDX6 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf220Q6PDX6 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf220Q6PDX6 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf220Q6PDX6 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf220Q6PDX6 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Rnf220Q6PDX6 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Rnf220Q6PDX6 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf220Q6PDX6 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.91□□□□□ -0.34
Rnf220Q6PDX6 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf220Q6PDX6 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf220Q6PDX6 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Rnf220Q6PDX6 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf220Q6PDX6 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf220Q6PDX6 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rnf220Q6PDX6 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Rnf220Q6PDX6 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.91□□□□□ -0.34
Rnf220Q6PDX6 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf220Q6PDX6 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf220Q6PDX6 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
Rnf220Q6PDX6 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf220Q6PDX6 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf220Q6PDX6 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf220Q6PDX6 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf220Q6PDX6 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf220Q6PDX6 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf220Q6PDX6 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf220Q6PDX6 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf220Q6PDX6 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Rnf220Q6PDX6 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Rnf220Q6PDX6 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf220Q6PDX6 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf220Q6PDX6 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms