Protein–RNA interactions for Protein: Q6PDM2

Srsf1, Serine/arginine-rich splicing factor 1, mousemouse

Known RBP Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srsf1Q6PDM2 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Srsf1Q6PDM2 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Srsf1Q6PDM2 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Srsf1Q6PDM2 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Srsf1Q6PDM2 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.75□□□□□ -0.53
Srsf1Q6PDM2 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Srsf1Q6PDM2 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Srsf1Q6PDM2 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Srsf1Q6PDM2 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Srsf1Q6PDM2 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Srsf1Q6PDM2 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Srsf1Q6PDM2 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Srsf1Q6PDM2 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Srsf1Q6PDM2 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 Gm3890-201ENSMUST00000182416 207 ntBASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srsf1Q6PDM2 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srsf1Q6PDM2 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srsf1Q6PDM2 Gm29340-201ENSMUST00000188763 3854 ntBASIC11.73□□□□□ -0.53
Srsf1Q6PDM2 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srsf1Q6PDM2 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srsf1Q6PDM2 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Srsf1Q6PDM2 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Srsf1Q6PDM2 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srsf1Q6PDM2 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Srsf1Q6PDM2 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srsf1Q6PDM2 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Srsf1Q6PDM2 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Srsf1Q6PDM2 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Srsf1Q6PDM2 Gm11618-201ENSMUST00000117946 267 ntBASIC11.73□□□□□ -0.53
Srsf1Q6PDM2 Gm13123-201ENSMUST00000122173 492 ntBASIC11.73□□□□□ -0.53
Srsf1Q6PDM2 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.73□□□□□ -0.53
Srsf1Q6PDM2 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Srsf1Q6PDM2 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srsf1Q6PDM2 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.73□□□□□ -0.53
Srsf1Q6PDM2 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Srsf1Q6PDM2 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srsf1Q6PDM2 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC11.73□□□□□ -0.53
Srsf1Q6PDM2 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Srsf1Q6PDM2 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Srsf1Q6PDM2 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Srsf1Q6PDM2 Gm45770-201ENSMUST00000212105 616 ntBASIC11.73□□□□□ -0.53
Srsf1Q6PDM2 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Srsf1Q6PDM2 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srsf1Q6PDM2 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srsf1Q6PDM2 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srsf1Q6PDM2 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Srsf1Q6PDM2 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srsf1Q6PDM2 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Srsf1Q6PDM2 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.73□□□□□ -0.53
Srsf1Q6PDM2 Gm26315-201ENSMUST00000083890 321 ntBASIC11.73□□□□□ -0.53
Srsf1Q6PDM2 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Srsf1Q6PDM2 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms