Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Casc4Q6P2L7 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Casc4Q6P2L7 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.19
Casc4Q6P2L7 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.83□□□□□ -0.2
Casc4Q6P2L7 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Casc4Q6P2L7 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Casc4Q6P2L7 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Casc4Q6P2L7 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Casc4Q6P2L7 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.83□□□□□ -0.2
Casc4Q6P2L7 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Casc4Q6P2L7 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.83□□□□□ -0.2
Casc4Q6P2L7 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.83□□□□□ -0.2
Casc4Q6P2L7 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Casc4Q6P2L7 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.83□□□□□ -0.2
Casc4Q6P2L7 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.83□□□□□ -0.2
Casc4Q6P2L7 Gm24420-201ENSMUST00000176676 59 ntBASIC13.83□□□□□ -0.2
Casc4Q6P2L7 Gm21854-201ENSMUST00000179901 471 ntBASIC13.83□□□□□ -0.2
Casc4Q6P2L7 Gm28760-201ENSMUST00000185995 736 ntBASIC13.83□□□□□ -0.2
Casc4Q6P2L7 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.83□□□□□ -0.2
Casc4Q6P2L7 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Casc4Q6P2L7 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Casc4Q6P2L7 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.83□□□□□ -0.2
Casc4Q6P2L7 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Casc4Q6P2L7 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Casc4Q6P2L7 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Casc4Q6P2L7 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Casc4Q6P2L7 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Casc4Q6P2L7 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Casc4Q6P2L7 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.83□□□□□ -0.2
Casc4Q6P2L7 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Casc4Q6P2L7 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Casc4Q6P2L7 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Casc4Q6P2L7 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Casc4Q6P2L7 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Matn2-206ENSMUST00000228570 2798 ntBASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Gm42612-201ENSMUST00000197986 623 ntBASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Gm43170-201ENSMUST00000199827 612 ntBASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.82□□□□□ -0.2
Casc4Q6P2L7 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Casc4Q6P2L7 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.81□□□□□ -0.2
Casc4Q6P2L7 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Casc4Q6P2L7 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Casc4Q6P2L7 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Casc4Q6P2L7 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Casc4Q6P2L7 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.81□□□□□ -0.2
Casc4Q6P2L7 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Casc4Q6P2L7 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.81□□□□□ -0.2
Casc4Q6P2L7 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Casc4Q6P2L7 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Casc4Q6P2L7 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.81□□□□□ -0.2
Casc4Q6P2L7 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Casc4Q6P2L7 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.81□□□□□ -0.2
Casc4Q6P2L7 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Casc4Q6P2L7 Gm2445-201ENSMUST00000182798 989 ntBASIC13.81□□□□□ -0.2
Casc4Q6P2L7 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.81□□□□□ -0.2
Casc4Q6P2L7 Gm44719-201ENSMUST00000206404 149 ntBASIC13.81□□□□□ -0.2
Casc4Q6P2L7 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms