Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Gm26513-201ENSMUST00000181802 2489 ntBASIC17.25■□□□□ 0.35
Clcn1Q64347 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn1Q64347 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn1Q64347 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Clcn1Q64347 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn1Q64347 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC17.25■□□□□ 0.35
Clcn1Q64347 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn1Q64347 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC17.25■□□□□ 0.35
Clcn1Q64347 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcn1Q64347 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Clcn1Q64347 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcn1Q64347 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcn1Q64347 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcn1Q64347 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Clcn1Q64347 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Clcn1Q64347 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcn1Q64347 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Clcn1Q64347 AC166491.1-201ENSMUST00000227053 2308 ntBASIC17.24■□□□□ 0.35
Clcn1Q64347 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcn1Q64347 Gm38102-201ENSMUST00000192791 1935 ntBASIC17.24■□□□□ 0.35
Clcn1Q64347 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcn1Q64347 Gm1335-201ENSMUST00000121653 386 ntBASIC17.24■□□□□ 0.35
Clcn1Q64347 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Clcn1Q64347 Gm3809-201ENSMUST00000180973 1006 ntBASIC17.24■□□□□ 0.35
Clcn1Q64347 Gm27682-201ENSMUST00000183930 110 ntBASIC17.24■□□□□ 0.35
Clcn1Q64347 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC17.24■□□□□ 0.35
Clcn1Q64347 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC17.24■□□□□ 0.35
Clcn1Q64347 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Clcn1Q64347 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC17.24■□□□□ 0.35
Clcn1Q64347 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC17.24■□□□□ 0.35
Clcn1Q64347 AC073947.2-201ENSMUST00000215888 1130 ntBASIC17.24■□□□□ 0.35
Clcn1Q64347 Gm7172-201ENSMUST00000218047 1152 ntBASIC17.24■□□□□ 0.35
Clcn1Q64347 CT009738.1-201ENSMUST00000219031 809 ntBASIC17.24■□□□□ 0.35
Clcn1Q64347 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Clcn1Q64347 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcn1Q64347 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcn1Q64347 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Clcn1Q64347 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcn1Q64347 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcn1Q64347 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcn1Q64347 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Clcn1Q64347 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcn1Q64347 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC17.24■□□□□ 0.35
Clcn1Q64347 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Clcn1Q64347 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcn1Q64347 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcn1Q64347 Gm20632-201ENSMUST00000176760 2427 ntBASIC17.23■□□□□ 0.35
Clcn1Q64347 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clcn1Q64347 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Clcn1Q64347 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clcn1Q64347 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clcn1Q64347 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clcn1Q64347 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC17.23■□□□□ 0.35
Clcn1Q64347 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clcn1Q64347 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Clcn1Q64347 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Clcn1Q64347 Gm14723-201ENSMUST00000118686 215 ntBASIC17.23■□□□□ 0.35
Clcn1Q64347 Gm38241-201ENSMUST00000192641 898 ntBASIC17.23■□□□□ 0.35
Clcn1Q64347 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Clcn1Q64347 Gm42929-201ENSMUST00000198374 1286 ntBASIC17.23■□□□□ 0.35
Clcn1Q64347 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Clcn1Q64347 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC17.23■□□□□ 0.35
Clcn1Q64347 Gm6013-201ENSMUST00000212264 699 ntBASIC17.23■□□□□ 0.35
Clcn1Q64347 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC17.23■□□□□ 0.35
Clcn1Q64347 AC154276.1-201ENSMUST00000228874 1299 ntBASIC17.23■□□□□ 0.35
Clcn1Q64347 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clcn1Q64347 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Clcn1Q64347 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clcn1Q64347 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clcn1Q64347 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clcn1Q64347 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clcn1Q64347 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clcn1Q64347 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clcn1Q64347 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clcn1Q64347 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clcn1Q64347 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clcn1Q64347 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Clcn1Q64347 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clcn1Q64347 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC17.22■□□□□ 0.35
Clcn1Q64347 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clcn1Q64347 Matn2-206ENSMUST00000228570 2798 ntBASIC17.22■□□□□ 0.35
Clcn1Q64347 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clcn1Q64347 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Clcn1Q64347 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clcn1Q64347 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Clcn1Q64347 Gm13369-201ENSMUST00000119442 987 ntBASIC17.22■□□□□ 0.35
Clcn1Q64347 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Clcn1Q64347 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Clcn1Q64347 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Clcn1Q64347 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clcn1Q64347 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Clcn1Q64347 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Clcn1Q64347 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clcn1Q64347 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clcn1Q64347 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clcn1Q64347 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clcn1Q64347 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Clcn1Q64347 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clcn1Q64347 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clcn1Q64347 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms