Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scn9aQ62205 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scn9aQ62205 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scn9aQ62205 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scn9aQ62205 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
Scn9aQ62205 Gm11531-201ENSMUST00000117614 555 ntBASIC15.74■□□□□ 0.11
Scn9aQ62205 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC15.74■□□□□ 0.11
Scn9aQ62205 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC15.74■□□□□ 0.11
Scn9aQ62205 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC15.74■□□□□ 0.11
Scn9aQ62205 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC15.74■□□□□ 0.11
Scn9aQ62205 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scn9aQ62205 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Scn9aQ62205 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scn9aQ62205 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
Scn9aQ62205 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scn9aQ62205 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Scn9aQ62205 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Scn9aQ62205 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scn9aQ62205 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn9aQ62205 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn9aQ62205 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn9aQ62205 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Scn9aQ62205 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn9aQ62205 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Scn9aQ62205 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn9aQ62205 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn9aQ62205 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
Scn9aQ62205 Gm14109-201ENSMUST00000118814 309 ntBASIC15.73■□□□□ 0.11
Scn9aQ62205 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC15.73■□□□□ 0.11
Scn9aQ62205 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn9aQ62205 Gm22121-201ENSMUST00000175148 54 ntBASIC15.73■□□□□ 0.11
Scn9aQ62205 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC15.73■□□□□ 0.11
Scn9aQ62205 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Scn9aQ62205 Gm7467-201ENSMUST00000185173 652 ntBASIC15.73■□□□□ 0.11
Scn9aQ62205 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC15.73■□□□□ 0.11
Scn9aQ62205 Gm5950-201ENSMUST00000213337 772 ntBASIC15.73■□□□□ 0.11
Scn9aQ62205 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn9aQ62205 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn9aQ62205 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Scn9aQ62205 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn9aQ62205 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn9aQ62205 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn9aQ62205 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn9aQ62205 Gm4366-201ENSMUST00000201488 1342 ntBASIC15.73■□□□□ 0.11
Scn9aQ62205 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn9aQ62205 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn9aQ62205 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn9aQ62205 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC15.73■□□□□ 0.11
Scn9aQ62205 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn9aQ62205 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn9aQ62205 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn9aQ62205 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn9aQ62205 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC15.73■□□□□ 0.11
Scn9aQ62205 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn9aQ62205 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC15.73■□□□□ 0.11
Scn9aQ62205 Gm43378-201ENSMUST00000199336 582 ntBASIC15.73■□□□□ 0.11
Scn9aQ62205 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC15.73■□□□□ 0.11
Scn9aQ62205 Gm9826-201ENSMUST00000029124 1299 ntBASIC15.73■□□□□ 0.11
Scn9aQ62205 Gm8385-201ENSMUST00000058999 643 ntBASIC15.73■□□□□ 0.11
Scn9aQ62205 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
Scn9aQ62205 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn9aQ62205 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn9aQ62205 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn9aQ62205 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Scn9aQ62205 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Scn9aQ62205 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
Scn9aQ62205 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn9aQ62205 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Scn9aQ62205 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn9aQ62205 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn9aQ62205 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn9aQ62205 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Scn9aQ62205 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Scn9aQ62205 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
Scn9aQ62205 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
Scn9aQ62205 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC15.72■□□□□ 0.11
Scn9aQ62205 AU022133-201ENSMUST00000200601 873 ntBASIC15.72■□□□□ 0.11
Scn9aQ62205 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
Scn9aQ62205 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn9aQ62205 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn9aQ62205 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn9aQ62205 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.72■□□□□ 0.11
Scn9aQ62205 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
Scn9aQ62205 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn9aQ62205 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn9aQ62205 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Scn9aQ62205 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Scn9aQ62205 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Scn9aQ62205 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC15.72■□□□□ 0.11
Scn9aQ62205 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn9aQ62205 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn9aQ62205 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn9aQ62205 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Scn9aQ62205 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn9aQ62205 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn9aQ62205 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn9aQ62205 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn9aQ62205 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn9aQ62205 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Scn9aQ62205 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms