Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Notch3Q61982 Gm23931-201ENSMUST00000103842 109 ntBASIC10.5□□□□□ -0.73
Notch3Q61982 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC10.5□□□□□ -0.73
Notch3Q61982 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC10.5□□□□□ -0.73
Notch3Q61982 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Notch3Q61982 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC10.5□□□□□ -0.73
Notch3Q61982 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.5□□□□□ -0.73
Notch3Q61982 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Notch3Q61982 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Notch3Q61982 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Notch3Q61982 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Notch3Q61982 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
Notch3Q61982 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Notch3Q61982 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Notch3Q61982 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Notch3Q61982 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Notch3Q61982 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Notch3Q61982 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Notch3Q61982 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Notch3Q61982 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Notch3Q61982 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Notch3Q61982 Ksr1-207ENSMUST00000226282 5260 ntBASIC10.5□□□□□ -0.73
Notch3Q61982 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Notch3Q61982 Gm9856-201ENSMUST00000217077 2578 ntBASIC10.5□□□□□ -0.73
Notch3Q61982 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Notch3Q61982 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Notch3Q61982 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Notch3Q61982 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Notch3Q61982 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC10.5□□□□□ -0.73
Notch3Q61982 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Notch3Q61982 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Notch3Q61982 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Notch3Q61982 Gm17795-201ENSMUST00000214505 757 ntBASIC10.5□□□□□ -0.73
Notch3Q61982 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC10.5□□□□□ -0.73
Notch3Q61982 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Notch3Q61982 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Notch3Q61982 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Notch3Q61982 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Notch3Q61982 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Notch3Q61982 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
Notch3Q61982 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Notch3Q61982 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Notch3Q61982 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Notch3Q61982 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
Notch3Q61982 Trav4d-2-201ENSMUST00000120914 335 ntBASIC10.49□□□□□ -0.73
Notch3Q61982 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC10.49□□□□□ -0.73
Notch3Q61982 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.49□□□□□ -0.73
Notch3Q61982 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Notch3Q61982 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC10.49□□□□□ -0.73
Notch3Q61982 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Notch3Q61982 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Notch3Q61982 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC10.49□□□□□ -0.73
Notch3Q61982 Gm9252-201ENSMUST00000172364 1602 ntBASIC10.49□□□□□ -0.73
Notch3Q61982 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Notch3Q61982 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Notch3Q61982 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Notch3Q61982 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Notch3Q61982 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Notch3Q61982 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Notch3Q61982 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Notch3Q61982 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Notch3Q61982 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Notch3Q61982 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Notch3Q61982 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC10.49□□□□□ -0.73
Notch3Q61982 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Notch3Q61982 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Notch3Q61982 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC10.49□□□□□ -0.73
Notch3Q61982 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC10.49□□□□□ -0.73
Notch3Q61982 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Notch3Q61982 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Notch3Q61982 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Notch3Q61982 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Notch3Q61982 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Notch3Q61982 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Notch3Q61982 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Notch3Q61982 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Notch3Q61982 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Notch3Q61982 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Notch3Q61982 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Notch3Q61982 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Notch3Q61982 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Notch3Q61982 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Notch3Q61982 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Notch3Q61982 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC10.48□□□□□ -0.73
Notch3Q61982 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Notch3Q61982 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.73
Notch3Q61982 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC10.48□□□□□ -0.73
Notch3Q61982 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC10.48□□□□□ -0.73
Notch3Q61982 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Notch3Q61982 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
Notch3Q61982 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC10.48□□□□□ -0.73
Notch3Q61982 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Notch3Q61982 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Notch3Q61982 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Notch3Q61982 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Notch3Q61982 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Notch3Q61982 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Notch3Q61982 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Notch3Q61982 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Notch3Q61982 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms