Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Foxc1Q61572 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Foxc1Q61572 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Foxc1Q61572 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Foxc1Q61572 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Foxc1Q61572 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Foxc1Q61572 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Foxc1Q61572 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Foxc1Q61572 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Foxc1Q61572 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC10.19□□□□□ -0.78
Foxc1Q61572 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Foxc1Q61572 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Foxc1Q61572 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Foxc1Q61572 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Foxc1Q61572 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Foxc1Q61572 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Foxc1Q61572 Fbxl12-205ENSMUST00000140702 1555 ntBASIC10.18□□□□□ -0.78
Foxc1Q61572 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Foxc1Q61572 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Foxc1Q61572 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Foxc1Q61572 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Foxc1Q61572 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Foxc1Q61572 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Foxc1Q61572 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Foxc1Q61572 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Foxc1Q61572 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Foxc1Q61572 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Foxc1Q61572 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Foxc1Q61572 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC10.18□□□□□ -0.78
Foxc1Q61572 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Foxc1Q61572 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Foxc1Q61572 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Foxc1Q61572 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Foxc1Q61572 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC10.18□□□□□ -0.78
Foxc1Q61572 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Foxc1Q61572 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Foxc1Q61572 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Foxc1Q61572 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Foxc1Q61572 Gm15653-201ENSMUST00000119247 907 ntBASIC10.18□□□□□ -0.78
Foxc1Q61572 Gm8312-201ENSMUST00000119380 618 ntBASIC10.18□□□□□ -0.78
Foxc1Q61572 Gm12882-201ENSMUST00000121696 517 ntBASIC10.18□□□□□ -0.78
Foxc1Q61572 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC10.18□□□□□ -0.78
Foxc1Q61572 Gm16112-201ENSMUST00000159075 382 ntBASIC10.18□□□□□ -0.78
Foxc1Q61572 1600019K03Rik-201ENSMUST00000187829 477 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Foxc1Q61572 Gm37073-201ENSMUST00000192469 1222 ntBASIC10.18□□□□□ -0.78
Foxc1Q61572 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Foxc1Q61572 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Foxc1Q61572 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Foxc1Q61572 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Foxc1Q61572 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Foxc1Q61572 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Foxc1Q61572 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Foxc1Q61572 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Foxc1Q61572 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Foxc1Q61572 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Foxc1Q61572 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Foxc1Q61572 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Foxc1Q61572 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Foxc1Q61572 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Foxc1Q61572 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Foxc1Q61572 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Foxc1Q61572 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Foxc1Q61572 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Foxc1Q61572 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Foxc1Q61572 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Foxc1Q61572 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Foxc1Q61572 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
Foxc1Q61572 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Foxc1Q61572 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Foxc1Q61572 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Foxc1Q61572 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Foxc1Q61572 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Foxc1Q61572 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Foxc1Q61572 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Foxc1Q61572 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Foxc1Q61572 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Foxc1Q61572 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Foxc1Q61572 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Foxc1Q61572 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Foxc1Q61572 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Foxc1Q61572 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Foxc1Q61572 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Foxc1Q61572 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Foxc1Q61572 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Foxc1Q61572 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Foxc1Q61572 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Foxc1Q61572 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Foxc1Q61572 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Foxc1Q61572 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Foxc1Q61572 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Foxc1Q61572 Olfr362-201ENSMUST00000100144 954 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Foxc1Q61572 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Foxc1Q61572 Gm11893-201ENSMUST00000117829 491 ntBASIC10.17□□□□□ -0.78
Foxc1Q61572 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Foxc1Q61572 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC10.17□□□□□ -0.78
Foxc1Q61572 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Foxc1Q61572 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC10.17□□□□□ -0.78
Foxc1Q61572 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC10.17□□□□□ -0.78
Foxc1Q61572 Gm27533-201ENSMUST00000183800 152 ntBASIC10.17□□□□□ -0.78
Foxc1Q61572 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms