Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox17Q61473 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox17Q61473 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox17Q61473 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox17Q61473 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.79□□□□□ -0.36
Sox17Q61473 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.79□□□□□ -0.36
Sox17Q61473 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Sox17Q61473 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox17Q61473 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox17Q61473 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox17Q61473 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Sox17Q61473 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox17Q61473 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.79□□□□□ -0.36
Sox17Q61473 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Sox17Q61473 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox17Q61473 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox17Q61473 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.78□□□□□ -0.36
Sox17Q61473 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox17Q61473 BC001981-202ENSMUST00000191393 1545 ntBASIC12.78□□□□□ -0.36
Sox17Q61473 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox17Q61473 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Sox17Q61473 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.78□□□□□ -0.36
Sox17Q61473 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox17Q61473 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sox17Q61473 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.78□□□□□ -0.36
Sox17Q61473 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Sox17Q61473 Gm13823-201ENSMUST00000119930 345 ntBASIC12.78□□□□□ -0.36
Sox17Q61473 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.78□□□□□ -0.36
Sox17Q61473 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.78□□□□□ -0.36
Sox17Q61473 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox17Q61473 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.78□□□□□ -0.36
Sox17Q61473 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sox17Q61473 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox17Q61473 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox17Q61473 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Sox17Q61473 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.78□□□□□ -0.36
Sox17Q61473 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox17Q61473 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox17Q61473 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox17Q61473 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.78□□□□□ -0.36
Sox17Q61473 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sox17Q61473 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox17Q61473 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox17Q61473 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Sox17Q61473 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox17Q61473 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox17Q61473 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox17Q61473 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox17Q61473 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox17Q61473 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox17Q61473 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sox17Q61473 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sox17Q61473 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sox17Q61473 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Sox17Q61473 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sox17Q61473 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Sox17Q61473 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sox17Q61473 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sox17Q61473 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sox17Q61473 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Sox17Q61473 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sox17Q61473 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sox17Q61473 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sox17Q61473 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
Sox17Q61473 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox17Q61473 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Sox17Q61473 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.77□□□□□ -0.37
Sox17Q61473 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.77□□□□□ -0.37
Sox17Q61473 Gm11543-201ENSMUST00000120758 370 ntBASIC12.77□□□□□ -0.37
Sox17Q61473 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.77□□□□□ -0.37
Sox17Q61473 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.77□□□□□ -0.37
Sox17Q61473 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.77□□□□□ -0.37
Sox17Q61473 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Sox17Q61473 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.77□□□□□ -0.37
Sox17Q61473 Gm28659-201ENSMUST00000188013 759 ntBASIC12.77□□□□□ -0.37
Sox17Q61473 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox17Q61473 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sox17Q61473 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox17Q61473 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.77□□□□□ -0.37
Sox17Q61473 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox17Q61473 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox17Q61473 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Sox17Q61473 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox17Q61473 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
Sox17Q61473 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.77□□□□□ -0.37
Sox17Q61473 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.77□□□□□ -0.37
Sox17Q61473 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.77□□□□□ -0.37
Sox17Q61473 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox17Q61473 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Sox17Q61473 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox17Q61473 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox17Q61473 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox17Q61473 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Sox17Q61473 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox17Q61473 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox17Q61473 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox17Q61473 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox17Q61473 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox17Q61473 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sox17Q61473 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms