Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col11a1Q61245 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col11a1Q61245 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col11a1Q61245 CT009713.10-201ENSMUST00000225013 1986 ntBASIC14.95□□□□□ -0.02
Col11a1Q61245 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col11a1Q61245 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.95□□□□□ -0.02
Col11a1Q61245 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.94□□□□□ -0.02
Col11a1Q61245 Gm13492-201ENSMUST00000119772 665 ntBASIC14.94□□□□□ -0.02
Col11a1Q61245 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col11a1Q61245 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.94□□□□□ -0.02
Col11a1Q61245 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col11a1Q61245 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC14.94□□□□□ -0.02
Col11a1Q61245 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col11a1Q61245 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col11a1Q61245 Gm37835-201ENSMUST00000193305 361 ntBASIC14.94□□□□□ -0.02
Col11a1Q61245 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col11a1Q61245 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC14.94□□□□□ -0.02
Col11a1Q61245 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col11a1Q61245 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col11a1Q61245 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col11a1Q61245 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col11a1Q61245 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Col11a1Q61245 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col11a1Q61245 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col11a1Q61245 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.94□□□□□ -0.02
Col11a1Q61245 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Col11a1Q61245 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col11a1Q61245 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.94□□□□□ -0.02
Col11a1Q61245 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC14.94□□□□□ -0.02
Col11a1Q61245 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.94□□□□□ -0.02
Col11a1Q61245 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col11a1Q61245 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col11a1Q61245 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col11a1Q61245 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Col11a1Q61245 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col11a1Q61245 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col11a1Q61245 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col11a1Q61245 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC14.94□□□□□ -0.02
Col11a1Q61245 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col11a1Q61245 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col11a1Q61245 CT025694.1-201ENSMUST00000226188 934 ntBASIC14.94□□□□□ -0.02
Col11a1Q61245 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col11a1Q61245 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col11a1Q61245 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col11a1Q61245 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col11a1Q61245 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col11a1Q61245 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col11a1Q61245 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.93□□□□□ -0.02
Col11a1Q61245 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col11a1Q61245 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col11a1Q61245 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col11a1Q61245 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Col11a1Q61245 Gm43081-201ENSMUST00000199082 1380 ntBASIC14.93□□□□□ -0.02
Col11a1Q61245 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
Col11a1Q61245 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col11a1Q61245 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col11a1Q61245 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Col11a1Q61245 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col11a1Q61245 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col11a1Q61245 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col11a1Q61245 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col11a1Q61245 Gm12208-201ENSMUST00000122004 163 ntBASIC14.93□□□□□ -0.02
Col11a1Q61245 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col11a1Q61245 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col11a1Q61245 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC14.93□□□□□ -0.02
Col11a1Q61245 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC14.93□□□□□ -0.02
Col11a1Q61245 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC14.93□□□□□ -0.02
Col11a1Q61245 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC14.93□□□□□ -0.02
Col11a1Q61245 Gm44551-201ENSMUST00000208804 171 ntBASIC14.93□□□□□ -0.02
Col11a1Q61245 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col11a1Q61245 Gm43908-201ENSMUST00000205074 1472 ntBASIC14.93□□□□□ -0.02
Col11a1Q61245 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col11a1Q61245 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.93□□□□□ -0.02
Col11a1Q61245 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Col11a1Q61245 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Col11a1Q61245 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col11a1Q61245 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col11a1Q61245 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col11a1Q61245 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col11a1Q61245 AC126444.1-201ENSMUST00000225938 1768 ntBASIC14.92□□□□□ -0.02
Col11a1Q61245 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col11a1Q61245 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col11a1Q61245 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Col11a1Q61245 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Col11a1Q61245 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.92□□□□□ -0.02
Col11a1Q61245 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC14.92□□□□□ -0.02
Col11a1Q61245 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Col11a1Q61245 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col11a1Q61245 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Col11a1Q61245 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC14.92□□□□□ -0.02
Col11a1Q61245 Gm45691-201ENSMUST00000206905 1120 ntBASIC14.92□□□□□ -0.02
Col11a1Q61245 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col11a1Q61245 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col11a1Q61245 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Col11a1Q61245 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col11a1Q61245 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col11a1Q61245 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Col11a1Q61245 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Col11a1Q61245 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col11a1Q61245 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms