Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col12a1Q60847 Gm11340-201ENSMUST00000119226 412 ntBASIC13.16□□□□□ -0.3
Col12a1Q60847 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col12a1Q60847 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.16□□□□□ -0.3
Col12a1Q60847 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.16□□□□□ -0.3
Col12a1Q60847 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col12a1Q60847 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col12a1Q60847 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col12a1Q60847 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col12a1Q60847 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col12a1Q60847 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col12a1Q60847 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC13.16□□□□□ -0.3
Col12a1Q60847 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Col12a1Q60847 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col12a1Q60847 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col12a1Q60847 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col12a1Q60847 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Col12a1Q60847 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col12a1Q60847 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col12a1Q60847 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col12a1Q60847 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.16□□□□□ -0.3
Col12a1Q60847 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.16□□□□□ -0.3
Col12a1Q60847 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col12a1Q60847 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Col12a1Q60847 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col12a1Q60847 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col12a1Q60847 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.15□□□□□ -0.3
Col12a1Q60847 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col12a1Q60847 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Col12a1Q60847 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Col12a1Q60847 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col12a1Q60847 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC13.15□□□□□ -0.3
Col12a1Q60847 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col12a1Q60847 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col12a1Q60847 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col12a1Q60847 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col12a1Q60847 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.15□□□□□ -0.3
Col12a1Q60847 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.15□□□□□ -0.3
Col12a1Q60847 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.15□□□□□ -0.3
Col12a1Q60847 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.15□□□□□ -0.3
Col12a1Q60847 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.15□□□□□ -0.3
Col12a1Q60847 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC13.15□□□□□ -0.3
Col12a1Q60847 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC13.15□□□□□ -0.3
Col12a1Q60847 Mir6546-201ENSMUST00000184460 62 ntBASIC13.15□□□□□ -0.3
Col12a1Q60847 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC13.15□□□□□ -0.3
Col12a1Q60847 Gm6458-201ENSMUST00000211573 635 ntBASIC13.15□□□□□ -0.3
Col12a1Q60847 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.15□□□□□ -0.3
Col12a1Q60847 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col12a1Q60847 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col12a1Q60847 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col12a1Q60847 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.15□□□□□ -0.3
Col12a1Q60847 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Col12a1Q60847 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col12a1Q60847 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Col12a1Q60847 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col12a1Q60847 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Col12a1Q60847 Gm23218-201ENSMUST00000158124 276 ntBASIC13.15□□□□□ -0.31
Col12a1Q60847 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.15□□□□□ -0.31
Col12a1Q60847 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Col12a1Q60847 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col12a1Q60847 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col12a1Q60847 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col12a1Q60847 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Col12a1Q60847 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col12a1Q60847 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col12a1Q60847 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col12a1Q60847 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col12a1Q60847 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col12a1Q60847 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col12a1Q60847 Gm11930-201ENSMUST00000117788 190 ntBASIC13.14□□□□□ -0.31
Col12a1Q60847 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col12a1Q60847 AC169511.2-201ENSMUST00000226674 2063 ntBASIC13.14□□□□□ -0.31
Col12a1Q60847 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC13.14□□□□□ -0.31
Col12a1Q60847 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Col12a1Q60847 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col12a1Q60847 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col12a1Q60847 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Col12a1Q60847 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col12a1Q60847 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col12a1Q60847 Gm13875-201ENSMUST00000120162 282 ntBASIC13.14□□□□□ -0.31
Col12a1Q60847 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col12a1Q60847 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col12a1Q60847 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col12a1Q60847 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col12a1Q60847 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.14□□□□□ -0.31
Col12a1Q60847 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col12a1Q60847 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col12a1Q60847 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col12a1Q60847 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col12a1Q60847 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col12a1Q60847 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Col12a1Q60847 Gm25951-201ENSMUST00000175330 64 ntBASIC13.13□□□□□ -0.31
Col12a1Q60847 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Col12a1Q60847 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col12a1Q60847 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col12a1Q60847 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col12a1Q60847 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col12a1Q60847 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col12a1Q60847 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col12a1Q60847 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms