Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Vps54Q5SPW0 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Vps54Q5SPW0 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps54Q5SPW0 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Vps54Q5SPW0 Gm19863-201ENSMUST00000192480 2218 ntBASIC16.35■□□□□ 0.21
Vps54Q5SPW0 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps54Q5SPW0 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC16.35■□□□□ 0.21
Vps54Q5SPW0 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps54Q5SPW0 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
Vps54Q5SPW0 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps54Q5SPW0 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Vps54Q5SPW0 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Vps54Q5SPW0 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Vps54Q5SPW0 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Vps54Q5SPW0 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Vps54Q5SPW0 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC16.35■□□□□ 0.21
Vps54Q5SPW0 Gm38223-201ENSMUST00000194484 695 ntBASIC16.35■□□□□ 0.21
Vps54Q5SPW0 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC16.35■□□□□ 0.21
Vps54Q5SPW0 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps54Q5SPW0 Gm6983-201ENSMUST00000214912 628 ntBASIC16.35■□□□□ 0.21
Vps54Q5SPW0 AC073947.2-201ENSMUST00000215888 1130 ntBASIC16.35■□□□□ 0.21
Vps54Q5SPW0 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Vps54Q5SPW0 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Vps54Q5SPW0 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps54Q5SPW0 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Vps54Q5SPW0 Gm8775-201ENSMUST00000170943 1327 ntBASIC16.35■□□□□ 0.21
Vps54Q5SPW0 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps54Q5SPW0 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps54Q5SPW0 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC16.35■□□□□ 0.21
Vps54Q5SPW0 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Vps54Q5SPW0 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps54Q5SPW0 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps54Q5SPW0 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps54Q5SPW0 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps54Q5SPW0 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps54Q5SPW0 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps54Q5SPW0 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Vps54Q5SPW0 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vps54Q5SPW0 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps54Q5SPW0 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps54Q5SPW0 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps54Q5SPW0 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps54Q5SPW0 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Vps54Q5SPW0 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vps54Q5SPW0 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps54Q5SPW0 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC16.34■□□□□ 0.21
Vps54Q5SPW0 Gm42550-201ENSMUST00000201553 960 ntBASIC16.34■□□□□ 0.21
Vps54Q5SPW0 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC16.34■□□□□ 0.21
Vps54Q5SPW0 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps54Q5SPW0 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vps54Q5SPW0 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC16.34■□□□□ 0.21
Vps54Q5SPW0 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vps54Q5SPW0 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Vps54Q5SPW0 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vps54Q5SPW0 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps54Q5SPW0 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps54Q5SPW0 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps54Q5SPW0 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps54Q5SPW0 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vps54Q5SPW0 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Vps54Q5SPW0 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vps54Q5SPW0 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC16.33■□□□□ 0.21
Vps54Q5SPW0 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Vps54Q5SPW0 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Vps54Q5SPW0 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Vps54Q5SPW0 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Vps54Q5SPW0 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.33■□□□□ 0.21
Vps54Q5SPW0 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
Vps54Q5SPW0 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Vps54Q5SPW0 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
Vps54Q5SPW0 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.33■□□□□ 0.21
Vps54Q5SPW0 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps54Q5SPW0 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps54Q5SPW0 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps54Q5SPW0 Gm12928-201ENSMUST00000117115 573 ntBASIC16.33■□□□□ 0.2
Vps54Q5SPW0 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Vps54Q5SPW0 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps54Q5SPW0 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Vps54Q5SPW0 AC130829.1-201ENSMUST00000221548 494 ntBASIC16.33■□□□□ 0.2
Vps54Q5SPW0 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Vps54Q5SPW0 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps54Q5SPW0 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps54Q5SPW0 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Vps54Q5SPW0 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Vps54Q5SPW0 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps54Q5SPW0 Gm13730-201ENSMUST00000121036 1462 ntBASIC16.33■□□□□ 0.2
Vps54Q5SPW0 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC16.33■□□□□ 0.2
Vps54Q5SPW0 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps54Q5SPW0 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Vps54Q5SPW0 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps54Q5SPW0 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps54Q5SPW0 Gm38197-201ENSMUST00000192320 2122 ntBASIC16.33■□□□□ 0.2
Vps54Q5SPW0 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Vps54Q5SPW0 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
Vps54Q5SPW0 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Vps54Q5SPW0 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps54Q5SPW0 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps54Q5SPW0 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC16.32■□□□□ 0.2
Vps54Q5SPW0 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps54Q5SPW0 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms