Protein–RNA interactions for Protein: Q5RJF7

Cacna2d4, Voltage-dependent calcium channel subunit alpha-2/delta-4, mousemouse

Predictions only

Length 1,116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna2d4Q5RJF7 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna2d4Q5RJF7 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna2d4Q5RJF7 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna2d4Q5RJF7 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Cacna2d4Q5RJF7 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Cacna2d4Q5RJF7 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna2d4Q5RJF7 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna2d4Q5RJF7 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna2d4Q5RJF7 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC15.21■□□□□ 0.03
Cacna2d4Q5RJF7 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna2d4Q5RJF7 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna2d4Q5RJF7 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC15.21■□□□□ 0.03
Cacna2d4Q5RJF7 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC15.21■□□□□ 0.03
Cacna2d4Q5RJF7 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna2d4Q5RJF7 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Cacna2d4Q5RJF7 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna2d4Q5RJF7 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC15.21■□□□□ 0.03
Cacna2d4Q5RJF7 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna2d4Q5RJF7 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna2d4Q5RJF7 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna2d4Q5RJF7 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna2d4Q5RJF7 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Cacna2d4Q5RJF7 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cacna2d4Q5RJF7 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Cacna2d4Q5RJF7 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Cacna2d4Q5RJF7 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cacna2d4Q5RJF7 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cacna2d4Q5RJF7 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Cacna2d4Q5RJF7 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cacna2d4Q5RJF7 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cacna2d4Q5RJF7 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cacna2d4Q5RJF7 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC15.2■□□□□ 0.02
Cacna2d4Q5RJF7 Gm15240-201ENSMUST00000118156 720 ntBASIC15.2■□□□□ 0.02
Cacna2d4Q5RJF7 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Cacna2d4Q5RJF7 Gm5866-201ENSMUST00000177881 973 ntBASIC15.2■□□□□ 0.02
Cacna2d4Q5RJF7 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC15.2■□□□□ 0.02
Cacna2d4Q5RJF7 Gm42612-201ENSMUST00000197986 623 ntBASIC15.2■□□□□ 0.02
Cacna2d4Q5RJF7 Gm43170-201ENSMUST00000199827 612 ntBASIC15.2■□□□□ 0.02
Cacna2d4Q5RJF7 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC15.2■□□□□ 0.02
Cacna2d4Q5RJF7 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC15.2■□□□□ 0.02
Cacna2d4Q5RJF7 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cacna2d4Q5RJF7 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC15.2■□□□□ 0.02
Cacna2d4Q5RJF7 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cacna2d4Q5RJF7 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cacna2d4Q5RJF7 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cacna2d4Q5RJF7 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cacna2d4Q5RJF7 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cacna2d4Q5RJF7 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Cacna2d4Q5RJF7 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Cacna2d4Q5RJF7 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna2d4Q5RJF7 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Cacna2d4Q5RJF7 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC15.19■□□□□ 0.02
Cacna2d4Q5RJF7 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC15.19■□□□□ 0.02
Cacna2d4Q5RJF7 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna2d4Q5RJF7 Gm30238-201ENSMUST00000195528 2603 ntBASIC15.19■□□□□ 0.02
Cacna2d4Q5RJF7 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna2d4Q5RJF7 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna2d4Q5RJF7 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna2d4Q5RJF7 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna2d4Q5RJF7 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna2d4Q5RJF7 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Cacna2d4Q5RJF7 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna2d4Q5RJF7 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Cacna2d4Q5RJF7 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna2d4Q5RJF7 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Cacna2d4Q5RJF7 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC15.19■□□□□ 0.02
Cacna2d4Q5RJF7 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC15.19■□□□□ 0.02
Cacna2d4Q5RJF7 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC15.19■□□□□ 0.02
Cacna2d4Q5RJF7 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC15.19■□□□□ 0.02
Cacna2d4Q5RJF7 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC15.19■□□□□ 0.02
Cacna2d4Q5RJF7 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC15.19■□□□□ 0.02
Cacna2d4Q5RJF7 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC15.19■□□□□ 0.02
Cacna2d4Q5RJF7 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC15.19■□□□□ 0.02
Cacna2d4Q5RJF7 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Cacna2d4Q5RJF7 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC15.19■□□□□ 0.02
Cacna2d4Q5RJF7 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Cacna2d4Q5RJF7 CT025535.1-201ENSMUST00000227172 491 ntBASIC15.19■□□□□ 0.02
Cacna2d4Q5RJF7 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna2d4Q5RJF7 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna2d4Q5RJF7 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna2d4Q5RJF7 Gm2423-201ENSMUST00000074863 733 ntBASIC15.19■□□□□ 0.02
Cacna2d4Q5RJF7 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Cacna2d4Q5RJF7 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna2d4Q5RJF7 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC15.19■□□□□ 0.02
Cacna2d4Q5RJF7 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna2d4Q5RJF7 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Cacna2d4Q5RJF7 Ldb3-207ENSMUST00000227819 1499 ntBASIC15.19■□□□□ 0.02
Cacna2d4Q5RJF7 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Cacna2d4Q5RJF7 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna2d4Q5RJF7 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna2d4Q5RJF7 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna2d4Q5RJF7 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna2d4Q5RJF7 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna2d4Q5RJF7 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC15.19■□□□□ 0.02
Cacna2d4Q5RJF7 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cacna2d4Q5RJF7 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cacna2d4Q5RJF7 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Cacna2d4Q5RJF7 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cacna2d4Q5RJF7 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cacna2d4Q5RJF7 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms