Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rc3h1Q4VGL6 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rc3h1Q4VGL6 Rn7sk-201ENSMUST00000083103 331 ntBASIC15.74■□□□□ 0.11
Rc3h1Q4VGL6 Gm26315-201ENSMUST00000083890 321 ntBASIC15.74■□□□□ 0.11
Rc3h1Q4VGL6 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rc3h1Q4VGL6 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Rc3h1Q4VGL6 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rc3h1Q4VGL6 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rc3h1Q4VGL6 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rc3h1Q4VGL6 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rc3h1Q4VGL6 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC15.74■□□□□ 0.11
Rc3h1Q4VGL6 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.74■□□□□ 0.11
Rc3h1Q4VGL6 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rc3h1Q4VGL6 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rc3h1Q4VGL6 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
Rc3h1Q4VGL6 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rc3h1Q4VGL6 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rc3h1Q4VGL6 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rc3h1Q4VGL6 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Rc3h1Q4VGL6 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rc3h1Q4VGL6 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rc3h1Q4VGL6 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.73■□□□□ 0.11
Rc3h1Q4VGL6 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rc3h1Q4VGL6 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rc3h1Q4VGL6 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rc3h1Q4VGL6 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rc3h1Q4VGL6 AC131068.2-201ENSMUST00000226175 1453 ntBASIC15.73■□□□□ 0.11
Rc3h1Q4VGL6 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC15.73■□□□□ 0.11
Rc3h1Q4VGL6 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.73■□□□□ 0.11
Rc3h1Q4VGL6 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rc3h1Q4VGL6 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rc3h1Q4VGL6 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rc3h1Q4VGL6 Gm5687-201ENSMUST00000118252 640 ntBASIC15.73■□□□□ 0.11
Rc3h1Q4VGL6 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC15.73■□□□□ 0.11
Rc3h1Q4VGL6 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Rc3h1Q4VGL6 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rc3h1Q4VGL6 Proscos-202ENSMUST00000178990 666 ntBASIC15.73■□□□□ 0.11
Rc3h1Q4VGL6 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rc3h1Q4VGL6 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC15.73■□□□□ 0.11
Rc3h1Q4VGL6 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rc3h1Q4VGL6 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rc3h1Q4VGL6 Gm19863-201ENSMUST00000192480 2218 ntBASIC15.73■□□□□ 0.11
Rc3h1Q4VGL6 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rc3h1Q4VGL6 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rc3h1Q4VGL6 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rc3h1Q4VGL6 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rc3h1Q4VGL6 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.72■□□□□ 0.11
Rc3h1Q4VGL6 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.72■□□□□ 0.11
Rc3h1Q4VGL6 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rc3h1Q4VGL6 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rc3h1Q4VGL6 Gm13050-201ENSMUST00000122149 1345 ntBASIC15.72■□□□□ 0.11
Rc3h1Q4VGL6 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC15.72■□□□□ 0.11
Rc3h1Q4VGL6 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rc3h1Q4VGL6 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rc3h1Q4VGL6 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rc3h1Q4VGL6 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rc3h1Q4VGL6 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rc3h1Q4VGL6 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rc3h1Q4VGL6 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rc3h1Q4VGL6 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC15.72■□□□□ 0.11
Rc3h1Q4VGL6 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rc3h1Q4VGL6 Gm8810-201ENSMUST00000172895 754 ntBASIC15.72■□□□□ 0.11
Rc3h1Q4VGL6 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Rc3h1Q4VGL6 Gm29127-201ENSMUST00000188304 517 ntBASIC15.72■□□□□ 0.11
Rc3h1Q4VGL6 Gm38144-201ENSMUST00000192790 465 ntBASIC15.72■□□□□ 0.11
Rc3h1Q4VGL6 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Rc3h1Q4VGL6 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC15.72■□□□□ 0.11
Rc3h1Q4VGL6 AC122459.1-201ENSMUST00000228373 885 ntBASIC15.72■□□□□ 0.11
Rc3h1Q4VGL6 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rc3h1Q4VGL6 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rc3h1Q4VGL6 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rc3h1Q4VGL6 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rc3h1Q4VGL6 Gm3695-201ENSMUST00000087222 1009 ntBASIC15.72■□□□□ 0.11
Rc3h1Q4VGL6 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rc3h1Q4VGL6 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rc3h1Q4VGL6 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rc3h1Q4VGL6 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rc3h1Q4VGL6 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rc3h1Q4VGL6 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rc3h1Q4VGL6 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rc3h1Q4VGL6 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
Rc3h1Q4VGL6 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rc3h1Q4VGL6 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.72■□□□□ 0.11
Rc3h1Q4VGL6 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rc3h1Q4VGL6 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rc3h1Q4VGL6 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rc3h1Q4VGL6 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rc3h1Q4VGL6 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rc3h1Q4VGL6 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Rc3h1Q4VGL6 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rc3h1Q4VGL6 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rc3h1Q4VGL6 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rc3h1Q4VGL6 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rc3h1Q4VGL6 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rc3h1Q4VGL6 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rc3h1Q4VGL6 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rc3h1Q4VGL6 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC15.71■□□□□ 0.11
Rc3h1Q4VGL6 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rc3h1Q4VGL6 Gm9124-201ENSMUST00000191789 1092 ntBASIC15.71■□□□□ 0.11
Rc3h1Q4VGL6 Gm9113-201ENSMUST00000192510 1018 ntBASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms