Protein–RNA interactions for Protein: Q3V3V9

Carmil2, Capping protein, Arp2/3 and myosin-I linker protein 2, mousemouse

Predictions only

Length 1,296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Carmil2Q3V3V9 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Carmil2Q3V3V9 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Carmil2Q3V3V9 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Carmil2Q3V3V9 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Carmil2Q3V3V9 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Carmil2Q3V3V9 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Carmil2Q3V3V9 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Carmil2Q3V3V9 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Carmil2Q3V3V9 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Carmil2Q3V3V9 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC15.28■□□□□ 0.04
Carmil2Q3V3V9 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Carmil2Q3V3V9 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Carmil2Q3V3V9 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Carmil2Q3V3V9 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC15.28■□□□□ 0.04
Carmil2Q3V3V9 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Carmil2Q3V3V9 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC15.28■□□□□ 0.04
Carmil2Q3V3V9 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC15.28■□□□□ 0.04
Carmil2Q3V3V9 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Carmil2Q3V3V9 Gm27839-201ENSMUST00000184242 106 ntBASIC15.28■□□□□ 0.04
Carmil2Q3V3V9 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Carmil2Q3V3V9 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Carmil2Q3V3V9 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Carmil2Q3V3V9 Gm43570-201ENSMUST00000199951 3688 ntBASIC15.28■□□□□ 0.04
Carmil2Q3V3V9 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Carmil2Q3V3V9 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Carmil2Q3V3V9 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Carmil2Q3V3V9 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Carmil2Q3V3V9 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Carmil2Q3V3V9 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC15.28■□□□□ 0.04
Carmil2Q3V3V9 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC15.28■□□□□ 0.04
Carmil2Q3V3V9 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Carmil2Q3V3V9 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Carmil2Q3V3V9 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Carmil2Q3V3V9 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Carmil2Q3V3V9 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Carmil2Q3V3V9 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Carmil2Q3V3V9 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Carmil2Q3V3V9 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Carmil2Q3V3V9 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC15.27■□□□□ 0.04
Carmil2Q3V3V9 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Carmil2Q3V3V9 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Carmil2Q3V3V9 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Carmil2Q3V3V9 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC15.27■□□□□ 0.04
Carmil2Q3V3V9 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Carmil2Q3V3V9 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC15.27■□□□□ 0.04
Carmil2Q3V3V9 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Carmil2Q3V3V9 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Carmil2Q3V3V9 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Carmil2Q3V3V9 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC15.27■□□□□ 0.04
Carmil2Q3V3V9 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC15.27■□□□□ 0.04
Carmil2Q3V3V9 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Carmil2Q3V3V9 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Carmil2Q3V3V9 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Carmil2Q3V3V9 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Carmil2Q3V3V9 Gm18056-201ENSMUST00000207670 568 ntBASIC15.27■□□□□ 0.04
Carmil2Q3V3V9 Gm18061-201ENSMUST00000208350 562 ntBASIC15.27■□□□□ 0.04
Carmil2Q3V3V9 Gm18063-201ENSMUST00000208529 568 ntBASIC15.27■□□□□ 0.04
Carmil2Q3V3V9 Gm18052-201ENSMUST00000208750 559 ntBASIC15.27■□□□□ 0.04
Carmil2Q3V3V9 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Carmil2Q3V3V9 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Carmil2Q3V3V9 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Carmil2Q3V3V9 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Carmil2Q3V3V9 Gm12020-201ENSMUST00000119030 2042 ntBASIC15.27■□□□□ 0.03
Carmil2Q3V3V9 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.27■□□□□ 0.03
Carmil2Q3V3V9 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Carmil2Q3V3V9 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Carmil2Q3V3V9 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Carmil2Q3V3V9 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Carmil2Q3V3V9 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Carmil2Q3V3V9 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Carmil2Q3V3V9 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Carmil2Q3V3V9 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Carmil2Q3V3V9 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Carmil2Q3V3V9 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Carmil2Q3V3V9 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC15.26■□□□□ 0.03
Carmil2Q3V3V9 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Carmil2Q3V3V9 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Carmil2Q3V3V9 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Carmil2Q3V3V9 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Carmil2Q3V3V9 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Carmil2Q3V3V9 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Carmil2Q3V3V9 Grk6-205ENSMUST00000224653 2976 ntBASIC15.26■□□□□ 0.03
Carmil2Q3V3V9 Gm12626-201ENSMUST00000117339 1983 ntBASIC15.26■□□□□ 0.03
Carmil2Q3V3V9 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.26■□□□□ 0.03
Carmil2Q3V3V9 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Carmil2Q3V3V9 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Carmil2Q3V3V9 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Carmil2Q3V3V9 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Carmil2Q3V3V9 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Carmil2Q3V3V9 Gm15393-201ENSMUST00000120499 219 ntBASIC15.26■□□□□ 0.03
Carmil2Q3V3V9 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Carmil2Q3V3V9 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC15.26■□□□□ 0.03
Carmil2Q3V3V9 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Carmil2Q3V3V9 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Carmil2Q3V3V9 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Carmil2Q3V3V9 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Carmil2Q3V3V9 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Carmil2Q3V3V9 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Carmil2Q3V3V9 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
Carmil2Q3V3V9 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms