Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Mir6977-201ENSMUST00000184960 64 ntBASIC14.14□□□□□ -0.15
Trim80Q3V061 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.14□□□□□ -0.15
Trim80Q3V061 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim80Q3V061 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim80Q3V061 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.14□□□□□ -0.15
Trim80Q3V061 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim80Q3V061 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim80Q3V061 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim80Q3V061 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim80Q3V061 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim80Q3V061 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
Trim80Q3V061 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.14□□□□□ -0.15
Trim80Q3V061 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim80Q3V061 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trim80Q3V061 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.14□□□□□ -0.15
Trim80Q3V061 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim80Q3V061 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim80Q3V061 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.14□□□□□ -0.15
Trim80Q3V061 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim80Q3V061 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim80Q3V061 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim80Q3V061 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim80Q3V061 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim80Q3V061 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim80Q3V061 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim80Q3V061 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim80Q3V061 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.13□□□□□ -0.15
Trim80Q3V061 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim80Q3V061 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trim80Q3V061 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim80Q3V061 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.13□□□□□ -0.15
Trim80Q3V061 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim80Q3V061 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim80Q3V061 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.13□□□□□ -0.15
Trim80Q3V061 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim80Q3V061 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim80Q3V061 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim80Q3V061 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trim80Q3V061 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim80Q3V061 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim80Q3V061 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim80Q3V061 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim80Q3V061 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trim80Q3V061 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim80Q3V061 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.13□□□□□ -0.15
Trim80Q3V061 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trim80Q3V061 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Trim80Q3V061 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trim80Q3V061 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim80Q3V061 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.13□□□□□ -0.15
Trim80Q3V061 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim80Q3V061 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim80Q3V061 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim80Q3V061 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim80Q3V061 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim80Q3V061 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim80Q3V061 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim80Q3V061 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.12□□□□□ -0.15
Trim80Q3V061 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim80Q3V061 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim80Q3V061 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Trim80Q3V061 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Trim80Q3V061 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim80Q3V061 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim80Q3V061 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim80Q3V061 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Trim80Q3V061 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trim80Q3V061 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim80Q3V061 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim80Q3V061 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trim80Q3V061 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim80Q3V061 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim80Q3V061 Gm9385-201ENSMUST00000117563 472 ntBASIC14.12□□□□□ -0.15
Trim80Q3V061 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.12□□□□□ -0.15
Trim80Q3V061 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim80Q3V061 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim80Q3V061 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trim80Q3V061 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.12□□□□□ -0.15
Trim80Q3V061 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.12□□□□□ -0.15
Trim80Q3V061 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.12□□□□□ -0.15
Trim80Q3V061 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.12□□□□□ -0.15
Trim80Q3V061 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.12□□□□□ -0.15
Trim80Q3V061 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.12□□□□□ -0.15
Trim80Q3V061 Gm10154-201ENSMUST00000084445 354 ntBASIC14.12□□□□□ -0.15
Trim80Q3V061 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim80Q3V061 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.12□□□□□ -0.15
Trim80Q3V061 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim80Q3V061 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim80Q3V061 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.12□□□□□ -0.15
Trim80Q3V061 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim80Q3V061 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim80Q3V061 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Trim80Q3V061 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim80Q3V061 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim80Q3V061 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim80Q3V061 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim80Q3V061 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim80Q3V061 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.12□□□□□ -0.15
Trim80Q3V061 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim80Q3V061 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms