Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Khdc4Q3TCX3 Gm15957-201ENSMUST00000118893 974 ntBASIC13□□□□□ -0.33
Khdc4Q3TCX3 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13□□□□□ -0.33
Khdc4Q3TCX3 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13□□□□□ -0.33
Khdc4Q3TCX3 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13□□□□□ -0.33
Khdc4Q3TCX3 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13□□□□□ -0.33
Khdc4Q3TCX3 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13□□□□□ -0.33
Khdc4Q3TCX3 Gm6283-201ENSMUST00000182369 1000 ntBASIC13□□□□□ -0.33
Khdc4Q3TCX3 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13□□□□□ -0.33
Khdc4Q3TCX3 Gm18062-201ENSMUST00000208020 547 ntBASIC13□□□□□ -0.33
Khdc4Q3TCX3 Gm18055-201ENSMUST00000208254 547 ntBASIC13□□□□□ -0.33
Khdc4Q3TCX3 Gm17795-201ENSMUST00000214505 757 ntBASIC13□□□□□ -0.33
Khdc4Q3TCX3 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13□□□□□ -0.33
Khdc4Q3TCX3 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13□□□□□ -0.33
Khdc4Q3TCX3 AC125350.2-201ENSMUST00000224737 727 ntBASIC13□□□□□ -0.33
Khdc4Q3TCX3 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Khdc4Q3TCX3 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Khdc4Q3TCX3 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Khdc4Q3TCX3 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Khdc4Q3TCX3 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Khdc4Q3TCX3 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Khdc4Q3TCX3 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Khdc4Q3TCX3 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Khdc4Q3TCX3 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Khdc4Q3TCX3 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Khdc4Q3TCX3 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13□□□□□ -0.33
Khdc4Q3TCX3 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Khdc4Q3TCX3 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Khdc4Q3TCX3 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Khdc4Q3TCX3 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Khdc4Q3TCX3 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13□□□□□ -0.33
Khdc4Q3TCX3 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Khdc4Q3TCX3 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Khdc4Q3TCX3 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Khdc4Q3TCX3 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Khdc4Q3TCX3 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Khdc4Q3TCX3 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Khdc4Q3TCX3 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Khdc4Q3TCX3 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Khdc4Q3TCX3 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Khdc4Q3TCX3 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Khdc4Q3TCX3 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Khdc4Q3TCX3 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Khdc4Q3TCX3 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Khdc4Q3TCX3 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Khdc4Q3TCX3 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Khdc4Q3TCX3 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Khdc4Q3TCX3 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Khdc4Q3TCX3 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.99□□□□□ -0.33
Khdc4Q3TCX3 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Khdc4Q3TCX3 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Khdc4Q3TCX3 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Khdc4Q3TCX3 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.99□□□□□ -0.33
Khdc4Q3TCX3 Gm6266-201ENSMUST00000203844 806 ntBASIC12.99□□□□□ -0.33
Khdc4Q3TCX3 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.99□□□□□ -0.33
Khdc4Q3TCX3 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.99□□□□□ -0.33
Khdc4Q3TCX3 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Khdc4Q3TCX3 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Khdc4Q3TCX3 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Khdc4Q3TCX3 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Khdc4Q3TCX3 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Khdc4Q3TCX3 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Khdc4Q3TCX3 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Khdc4Q3TCX3 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Khdc4Q3TCX3 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Khdc4Q3TCX3 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Khdc4Q3TCX3 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Khdc4Q3TCX3 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Khdc4Q3TCX3 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Khdc4Q3TCX3 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Khdc4Q3TCX3 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Khdc4Q3TCX3 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Khdc4Q3TCX3 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Khdc4Q3TCX3 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Khdc4Q3TCX3 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Khdc4Q3TCX3 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.98□□□□□ -0.33
Khdc4Q3TCX3 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Khdc4Q3TCX3 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Khdc4Q3TCX3 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Khdc4Q3TCX3 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.98□□□□□ -0.33
Khdc4Q3TCX3 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Khdc4Q3TCX3 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Khdc4Q3TCX3 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.98□□□□□ -0.33
Khdc4Q3TCX3 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Khdc4Q3TCX3 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Khdc4Q3TCX3 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.98□□□□□ -0.33
Khdc4Q3TCX3 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Khdc4Q3TCX3 Gm9002-201ENSMUST00000178437 499 ntBASIC12.98□□□□□ -0.33
Khdc4Q3TCX3 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Khdc4Q3TCX3 Gm4804-201ENSMUST00000182234 999 ntBASIC12.98□□□□□ -0.33
Khdc4Q3TCX3 Gm28911-201ENSMUST00000188837 117 ntBASIC12.98□□□□□ -0.33
Khdc4Q3TCX3 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Khdc4Q3TCX3 Gm5279-201ENSMUST00000199575 745 ntBASIC12.98□□□□□ -0.33
Khdc4Q3TCX3 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Khdc4Q3TCX3 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Khdc4Q3TCX3 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Khdc4Q3TCX3 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Khdc4Q3TCX3 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.98□□□□□ -0.33
Khdc4Q3TCX3 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Khdc4Q3TCX3 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms