Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col9a2Q07643 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col9a2Q07643 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col9a2Q07643 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Col9a2Q07643 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col9a2Q07643 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col9a2Q07643 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
Col9a2Q07643 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col9a2Q07643 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col9a2Q07643 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col9a2Q07643 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col9a2Q07643 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col9a2Q07643 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col9a2Q07643 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col9a2Q07643 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col9a2Q07643 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col9a2Q07643 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Col9a2Q07643 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col9a2Q07643 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.73□□□□□ -0.05
Col9a2Q07643 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col9a2Q07643 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.73□□□□□ -0.05
Col9a2Q07643 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col9a2Q07643 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col9a2Q07643 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Col9a2Q07643 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col9a2Q07643 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col9a2Q07643 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC14.73□□□□□ -0.05
Col9a2Q07643 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col9a2Q07643 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col9a2Q07643 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col9a2Q07643 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col9a2Q07643 Gm37424-201ENSMUST00000191727 561 ntBASIC14.73□□□□□ -0.05
Col9a2Q07643 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Col9a2Q07643 Gm40466-201ENSMUST00000212174 422 ntBASIC14.73□□□□□ -0.05
Col9a2Q07643 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col9a2Q07643 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col9a2Q07643 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Col9a2Q07643 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col9a2Q07643 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
Col9a2Q07643 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Col9a2Q07643 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col9a2Q07643 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Col9a2Q07643 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col9a2Q07643 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col9a2Q07643 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col9a2Q07643 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.73□□□□□ -0.05
Col9a2Q07643 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.73□□□□□ -0.05
Col9a2Q07643 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col9a2Q07643 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col9a2Q07643 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.73□□□□□ -0.05
Col9a2Q07643 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col9a2Q07643 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Col9a2Q07643 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Col9a2Q07643 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col9a2Q07643 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col9a2Q07643 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Col9a2Q07643 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col9a2Q07643 Matn2-206ENSMUST00000228570 2798 ntBASIC14.72□□□□□ -0.05
Col9a2Q07643 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col9a2Q07643 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Col9a2Q07643 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col9a2Q07643 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col9a2Q07643 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col9a2Q07643 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.72□□□□□ -0.05
Col9a2Q07643 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.72□□□□□ -0.05
Col9a2Q07643 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.72□□□□□ -0.05
Col9a2Q07643 Gm29705-201ENSMUST00000212598 474 ntBASIC14.72□□□□□ -0.05
Col9a2Q07643 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col9a2Q07643 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col9a2Q07643 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col9a2Q07643 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col9a2Q07643 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col9a2Q07643 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col9a2Q07643 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col9a2Q07643 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Col9a2Q07643 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col9a2Q07643 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col9a2Q07643 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col9a2Q07643 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.72□□□□□ -0.05
Col9a2Q07643 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col9a2Q07643 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col9a2Q07643 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.71□□□□□ -0.05
Col9a2Q07643 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col9a2Q07643 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col9a2Q07643 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col9a2Q07643 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Col9a2Q07643 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col9a2Q07643 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col9a2Q07643 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col9a2Q07643 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col9a2Q07643 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col9a2Q07643 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.71□□□□□ -0.05
Col9a2Q07643 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col9a2Q07643 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col9a2Q07643 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.71□□□□□ -0.05
Col9a2Q07643 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col9a2Q07643 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col9a2Q07643 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col9a2Q07643 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col9a2Q07643 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms