Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm45500-201ENSMUST00000211676 803 ntBASIC20.46■□□□□ 0.87
Col17a1Q07563 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
Col17a1Q07563 AC168279.1-201ENSMUST00000214611 382 ntBASIC20.46■□□□□ 0.87
Col17a1Q07563 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC20.46■□□□□ 0.87
Col17a1Q07563 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Col17a1Q07563 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC20.46■□□□□ 0.87
Col17a1Q07563 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Col17a1Q07563 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col17a1Q07563 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Col17a1Q07563 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col17a1Q07563 Gm14451-201ENSMUST00000121581 1542 ntBASIC20.46■□□□□ 0.87
Col17a1Q07563 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col17a1Q07563 Gm7789-202ENSMUST00000211273 1400 ntBASIC20.46■□□□□ 0.87
Col17a1Q07563 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Col17a1Q07563 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col17a1Q07563 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col17a1Q07563 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col17a1Q07563 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC20.46■□□□□ 0.87
Col17a1Q07563 AC122197.2-201ENSMUST00000219196 1635 ntBASIC20.46■□□□□ 0.87
Col17a1Q07563 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Col17a1Q07563 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Col17a1Q07563 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col17a1Q07563 Gm3287-205ENSMUST00000228893 1332 ntBASIC20.45■□□□□ 0.86
Col17a1Q07563 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col17a1Q07563 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col17a1Q07563 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Col17a1Q07563 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Col17a1Q07563 Gm14034-201ENSMUST00000120147 551 ntBASIC20.45■□□□□ 0.86
Col17a1Q07563 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC20.45■□□□□ 0.86
Col17a1Q07563 Gm5340-201ENSMUST00000203733 880 ntBASIC20.45■□□□□ 0.86
Col17a1Q07563 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC20.45■□□□□ 0.86
Col17a1Q07563 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC20.45■□□□□ 0.86
Col17a1Q07563 AC166344.1-202ENSMUST00000224139 234 ntBASIC20.45■□□□□ 0.86
Col17a1Q07563 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC20.45■□□□□ 0.86
Col17a1Q07563 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Col17a1Q07563 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Col17a1Q07563 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col17a1Q07563 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col17a1Q07563 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col17a1Q07563 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col17a1Q07563 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col17a1Q07563 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col17a1Q07563 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Col17a1Q07563 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Col17a1Q07563 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col17a1Q07563 AC174678.1-201ENSMUST00000228007 2749 ntBASIC20.44■□□□□ 0.86
Col17a1Q07563 Gm12501-201ENSMUST00000119163 529 ntBASIC20.44■□□□□ 0.86
Col17a1Q07563 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
Col17a1Q07563 Gm45527-201ENSMUST00000211052 774 ntBASIC20.44■□□□□ 0.86
Col17a1Q07563 CT030135.2-201ENSMUST00000225255 893 ntBASIC20.44■□□□□ 0.86
Col17a1Q07563 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col17a1Q07563 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col17a1Q07563 Gm5513-201ENSMUST00000072982 1218 ntBASIC20.44■□□□□ 0.86
Col17a1Q07563 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Col17a1Q07563 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col17a1Q07563 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col17a1Q07563 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col17a1Q07563 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Col17a1Q07563 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col17a1Q07563 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col17a1Q07563 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col17a1Q07563 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col17a1Q07563 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Col17a1Q07563 Gm13384-201ENSMUST00000117166 1344 ntBASIC20.44■□□□□ 0.86
Col17a1Q07563 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col17a1Q07563 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col17a1Q07563 Gm2673-201ENSMUST00000120958 1608 ntBASIC20.44■□□□□ 0.86
Col17a1Q07563 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
Col17a1Q07563 Gm12516-201ENSMUST00000120819 385 ntBASIC20.43■□□□□ 0.86
Col17a1Q07563 Gm13937-201ENSMUST00000121000 988 ntBASIC20.43■□□□□ 0.86
Col17a1Q07563 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Col17a1Q07563 Gm28388-201ENSMUST00000186262 437 ntBASIC20.43■□□□□ 0.86
Col17a1Q07563 Gm28071-201ENSMUST00000190355 478 ntBASIC20.43■□□□□ 0.86
Col17a1Q07563 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
Col17a1Q07563 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Col17a1Q07563 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col17a1Q07563 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col17a1Q07563 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col17a1Q07563 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Col17a1Q07563 Zkscan14-203ENSMUST00000198959 2243 ntBASIC20.43■□□□□ 0.86
Col17a1Q07563 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Col17a1Q07563 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Col17a1Q07563 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col17a1Q07563 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col17a1Q07563 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Col17a1Q07563 Gm13492-201ENSMUST00000119772 665 ntBASIC20.43■□□□□ 0.86
Col17a1Q07563 Gm13022-201ENSMUST00000121181 285 ntBASIC20.43■□□□□ 0.86
Col17a1Q07563 Mir3060-201ENSMUST00000175339 83 ntBASIC20.43■□□□□ 0.86
Col17a1Q07563 Gm23771-201ENSMUST00000178702 110 ntBASIC20.43■□□□□ 0.86
Col17a1Q07563 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Col17a1Q07563 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Col17a1Q07563 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col17a1Q07563 Gm4482-201ENSMUST00000200876 742 ntBASIC20.43■□□□□ 0.86
Col17a1Q07563 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Col17a1Q07563 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col17a1Q07563 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col17a1Q07563 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Col17a1Q07563 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Col17a1Q07563 AC126549.2-201ENSMUST00000223997 1976 ntBASIC20.42■□□□□ 0.86
Col17a1Q07563 Gm37827-201ENSMUST00000194486 1542 ntBASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms