Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn3Q07409 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn3Q07409 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cntn3Q07409 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cntn3Q07409 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
Cntn3Q07409 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cntn3Q07409 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cntn3Q07409 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cntn3Q07409 Gm12485-201ENSMUST00000119641 291 ntBASIC14.28□□□□□ -0.12
Cntn3Q07409 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cntn3Q07409 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cntn3Q07409 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cntn3Q07409 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.28□□□□□ -0.12
Cntn3Q07409 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cntn3Q07409 Gm8602-201ENSMUST00000184045 607 ntBASIC14.28□□□□□ -0.12
Cntn3Q07409 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cntn3Q07409 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cntn3Q07409 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.28□□□□□ -0.12
Cntn3Q07409 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cntn3Q07409 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cntn3Q07409 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cntn3Q07409 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cntn3Q07409 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cntn3Q07409 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Cntn3Q07409 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cntn3Q07409 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cntn3Q07409 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cntn3Q07409 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.28□□□□□ -0.12
Cntn3Q07409 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cntn3Q07409 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Cntn3Q07409 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cntn3Q07409 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cntn3Q07409 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cntn3Q07409 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cntn3Q07409 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cntn3Q07409 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Cntn3Q07409 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Cntn3Q07409 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Cntn3Q07409 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cntn3Q07409 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cntn3Q07409 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cntn3Q07409 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.27□□□□□ -0.12
Cntn3Q07409 Gm14127-201ENSMUST00000117906 678 ntBASIC14.27□□□□□ -0.13
Cntn3Q07409 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cntn3Q07409 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.27□□□□□ -0.13
Cntn3Q07409 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.27□□□□□ -0.13
Cntn3Q07409 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.27□□□□□ -0.13
Cntn3Q07409 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.27□□□□□ -0.13
Cntn3Q07409 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.27□□□□□ -0.13
Cntn3Q07409 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Cntn3Q07409 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC14.27□□□□□ -0.13
Cntn3Q07409 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cntn3Q07409 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cntn3Q07409 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cntn3Q07409 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Cntn3Q07409 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cntn3Q07409 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.27□□□□□ -0.13
Cntn3Q07409 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cntn3Q07409 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cntn3Q07409 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cntn3Q07409 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cntn3Q07409 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cntn3Q07409 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cntn3Q07409 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.27□□□□□ -0.13
Cntn3Q07409 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.27□□□□□ -0.13
Cntn3Q07409 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cntn3Q07409 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cntn3Q07409 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cntn3Q07409 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cntn3Q07409 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cntn3Q07409 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cntn3Q07409 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cntn3Q07409 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cntn3Q07409 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.26□□□□□ -0.13
Cntn3Q07409 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cntn3Q07409 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cntn3Q07409 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.26□□□□□ -0.13
Cntn3Q07409 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cntn3Q07409 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cntn3Q07409 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cntn3Q07409 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.26□□□□□ -0.13
Cntn3Q07409 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.26□□□□□ -0.13
Cntn3Q07409 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cntn3Q07409 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cntn3Q07409 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cntn3Q07409 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.26□□□□□ -0.13
Cntn3Q07409 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cntn3Q07409 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cntn3Q07409 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cntn3Q07409 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cntn3Q07409 Gm2495-201ENSMUST00000191160 466 ntBASIC14.26□□□□□ -0.13
Cntn3Q07409 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cntn3Q07409 Gm5035-201ENSMUST00000215581 927 ntBASIC14.26□□□□□ -0.13
Cntn3Q07409 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Cntn3Q07409 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cntn3Q07409 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cntn3Q07409 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.26□□□□□ -0.13
Cntn3Q07409 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cntn3Q07409 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cntn3Q07409 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms