Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox4Q06831 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox4Q06831 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox4Q06831 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Sox4Q06831 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox4Q06831 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox4Q06831 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox4Q06831 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox4Q06831 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox4Q06831 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox4Q06831 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Sox4Q06831 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.41□□□□□ -0.26
Sox4Q06831 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox4Q06831 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox4Q06831 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox4Q06831 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox4Q06831 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sox4Q06831 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sox4Q06831 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sox4Q06831 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox4Q06831 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox4Q06831 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox4Q06831 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox4Q06831 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sox4Q06831 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox4Q06831 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox4Q06831 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox4Q06831 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.4□□□□□ -0.26
Sox4Q06831 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox4Q06831 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox4Q06831 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sox4Q06831 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.4□□□□□ -0.26
Sox4Q06831 Gm7653-201ENSMUST00000214567 508 ntBASIC13.4□□□□□ -0.26
Sox4Q06831 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.4□□□□□ -0.26
Sox4Q06831 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Sox4Q06831 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox4Q06831 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox4Q06831 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Sox4Q06831 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Sox4Q06831 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox4Q06831 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox4Q06831 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox4Q06831 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sox4Q06831 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox4Q06831 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox4Q06831 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox4Q06831 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sox4Q06831 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox4Q06831 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox4Q06831 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Sox4Q06831 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.27
Sox4Q06831 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Sox4Q06831 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox4Q06831 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox4Q06831 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox4Q06831 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.39□□□□□ -0.27
Sox4Q06831 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox4Q06831 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox4Q06831 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox4Q06831 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Sox4Q06831 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Sox4Q06831 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox4Q06831 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Sox4Q06831 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox4Q06831 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Sox4Q06831 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Sox4Q06831 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox4Q06831 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox4Q06831 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox4Q06831 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox4Q06831 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.39□□□□□ -0.27
Sox4Q06831 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox4Q06831 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.39□□□□□ -0.27
Sox4Q06831 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.39□□□□□ -0.27
Sox4Q06831 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.39□□□□□ -0.27
Sox4Q06831 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox4Q06831 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.39□□□□□ -0.27
Sox4Q06831 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.39□□□□□ -0.27
Sox4Q06831 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.39□□□□□ -0.27
Sox4Q06831 Gm45384-201ENSMUST00000210451 277 ntBASIC13.39□□□□□ -0.27
Sox4Q06831 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.39□□□□□ -0.27
Sox4Q06831 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox4Q06831 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox4Q06831 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox4Q06831 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox4Q06831 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.39□□□□□ -0.27
Sox4Q06831 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox4Q06831 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox4Q06831 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox4Q06831 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox4Q06831 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Sox4Q06831 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox4Q06831 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Sox4Q06831 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Sox4Q06831 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox4Q06831 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Sox4Q06831 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox4Q06831 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox4Q06831 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Sox4Q06831 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms