Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Atf4Q06507 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Atf4Q06507 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Atf4Q06507 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Atf4Q06507 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Atf4Q06507 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Atf4Q06507 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Atf4Q06507 Matn2-206ENSMUST00000228570 2798 ntBASIC13.16□□□□□ -0.3
Atf4Q06507 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Atf4Q06507 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Atf4Q06507 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Atf4Q06507 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Atf4Q06507 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Atf4Q06507 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Atf4Q06507 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Atf4Q06507 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atf4Q06507 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Atf4Q06507 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atf4Q06507 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Atf4Q06507 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atf4Q06507 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atf4Q06507 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atf4Q06507 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atf4Q06507 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.15□□□□□ -0.3
Atf4Q06507 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Atf4Q06507 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atf4Q06507 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atf4Q06507 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Atf4Q06507 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.15□□□□□ -0.3
Atf4Q06507 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.15□□□□□ -0.3
Atf4Q06507 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC13.15□□□□□ -0.3
Atf4Q06507 Gm17134-201ENSMUST00000166593 437 ntTSL 5 BASIC13.15□□□□□ -0.3
Atf4Q06507 Gm27701-201ENSMUST00000184498 110 ntBASIC13.15□□□□□ -0.3
Atf4Q06507 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.15□□□□□ -0.3
Atf4Q06507 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Atf4Q06507 Gm10297-201ENSMUST00000207136 651 ntBASIC13.15□□□□□ -0.3
Atf4Q06507 Gm45098-201ENSMUST00000207179 657 ntBASIC13.15□□□□□ -0.3
Atf4Q06507 AC153522.1-201ENSMUST00000220047 1090 ntBASIC13.15□□□□□ -0.3
Atf4Q06507 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atf4Q06507 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atf4Q06507 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atf4Q06507 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atf4Q06507 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Atf4Q06507 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atf4Q06507 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atf4Q06507 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atf4Q06507 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.15□□□□□ -0.3
Atf4Q06507 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atf4Q06507 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atf4Q06507 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atf4Q06507 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Atf4Q06507 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Atf4Q06507 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Atf4Q06507 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.15□□□□□ -0.31
Atf4Q06507 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Atf4Q06507 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Atf4Q06507 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atf4Q06507 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
Atf4Q06507 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Atf4Q06507 AC158595.1-201ENSMUST00000217989 1435 ntBASIC13.14□□□□□ -0.31
Atf4Q06507 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atf4Q06507 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atf4Q06507 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Atf4Q06507 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atf4Q06507 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atf4Q06507 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
Atf4Q06507 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atf4Q06507 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atf4Q06507 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atf4Q06507 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Atf4Q06507 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atf4Q06507 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Atf4Q06507 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.14□□□□□ -0.31
Atf4Q06507 Gm13255-201ENSMUST00000117255 547 ntBASIC13.14□□□□□ -0.31
Atf4Q06507 Gm6461-201ENSMUST00000120015 633 ntBASIC13.14□□□□□ -0.31
Atf4Q06507 Gm14133-201ENSMUST00000139471 1274 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Atf4Q06507 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Atf4Q06507 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.14□□□□□ -0.31
Atf4Q06507 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.14□□□□□ -0.31
Atf4Q06507 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC13.14□□□□□ -0.31
Atf4Q06507 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.14□□□□□ -0.31
Atf4Q06507 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC13.14□□□□□ -0.31
Atf4Q06507 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.14□□□□□ -0.31
Atf4Q06507 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.14□□□□□ -0.31
Atf4Q06507 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.14□□□□□ -0.31
Atf4Q06507 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Atf4Q06507 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atf4Q06507 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Atf4Q06507 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Atf4Q06507 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Atf4Q06507 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atf4Q06507 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atf4Q06507 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.14□□□□□ -0.31
Atf4Q06507 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atf4Q06507 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Atf4Q06507 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Atf4Q06507 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Atf4Q06507 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Atf4Q06507 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Atf4Q06507 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms