Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pfdn6Q03958 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pfdn6Q03958 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Pfdn6Q03958 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Pfdn6Q03958 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.72□□□□□ -0.21
Pfdn6Q03958 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Pfdn6Q03958 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pfdn6Q03958 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pfdn6Q03958 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.72□□□□□ -0.21
Pfdn6Q03958 Gm24420-201ENSMUST00000176676 59 ntBASIC13.72□□□□□ -0.21
Pfdn6Q03958 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.72□□□□□ -0.21
Pfdn6Q03958 Gm10766-202ENSMUST00000194123 606 ntBASIC13.72□□□□□ -0.21
Pfdn6Q03958 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pfdn6Q03958 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pfdn6Q03958 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pfdn6Q03958 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pfdn6Q03958 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Pfdn6Q03958 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.72□□□□□ -0.21
Pfdn6Q03958 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.72□□□□□ -0.21
Pfdn6Q03958 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pfdn6Q03958 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.72□□□□□ -0.21
Pfdn6Q03958 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pfdn6Q03958 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pfdn6Q03958 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.72□□□□□ -0.21
Pfdn6Q03958 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pfdn6Q03958 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.72□□□□□ -0.21
Pfdn6Q03958 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Pfdn6Q03958 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pfdn6Q03958 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pfdn6Q03958 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.72□□□□□ -0.21
Pfdn6Q03958 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pfdn6Q03958 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pfdn6Q03958 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.72□□□□□ -0.21
Pfdn6Q03958 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pfdn6Q03958 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pfdn6Q03958 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pfdn6Q03958 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.71□□□□□ -0.21
Pfdn6Q03958 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pfdn6Q03958 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pfdn6Q03958 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pfdn6Q03958 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.71□□□□□ -0.21
Pfdn6Q03958 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.71□□□□□ -0.21
Pfdn6Q03958 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pfdn6Q03958 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Pfdn6Q03958 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pfdn6Q03958 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pfdn6Q03958 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Pfdn6Q03958 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pfdn6Q03958 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Pfdn6Q03958 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.71□□□□□ -0.21
Pfdn6Q03958 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Pfdn6Q03958 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.71□□□□□ -0.21
Pfdn6Q03958 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pfdn6Q03958 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.71□□□□□ -0.21
Pfdn6Q03958 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Pfdn6Q03958 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pfdn6Q03958 Gm8927-201ENSMUST00000181978 981 ntBASIC13.71□□□□□ -0.21
Pfdn6Q03958 Gm27321-201ENSMUST00000185021 205 ntBASIC13.71□□□□□ -0.21
Pfdn6Q03958 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.71□□□□□ -0.21
Pfdn6Q03958 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pfdn6Q03958 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.71□□□□□ -0.21
Pfdn6Q03958 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pfdn6Q03958 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pfdn6Q03958 Gm3222-201ENSMUST00000071282 990 ntBASIC13.71□□□□□ -0.21
Pfdn6Q03958 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.71□□□□□ -0.21
Pfdn6Q03958 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pfdn6Q03958 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Pfdn6Q03958 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pfdn6Q03958 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pfdn6Q03958 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Pfdn6Q03958 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pfdn6Q03958 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pfdn6Q03958 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pfdn6Q03958 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Pfdn6Q03958 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.71□□□□□ -0.22
Pfdn6Q03958 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.71□□□□□ -0.22
Pfdn6Q03958 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pfdn6Q03958 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pfdn6Q03958 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pfdn6Q03958 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pfdn6Q03958 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pfdn6Q03958 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pfdn6Q03958 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pfdn6Q03958 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pfdn6Q03958 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pfdn6Q03958 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pfdn6Q03958 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pfdn6Q03958 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.7□□□□□ -0.22
Pfdn6Q03958 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pfdn6Q03958 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Pfdn6Q03958 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pfdn6Q03958 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pfdn6Q03958 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.7□□□□□ -0.22
Pfdn6Q03958 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pfdn6Q03958 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Pfdn6Q03958 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pfdn6Q03958 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pfdn6Q03958 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pfdn6Q03958 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pfdn6Q03958 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms