Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col1a2Q01149 Gm9823-201ENSMUST00000051212 327 ntBASIC16.94■□□□□ 0.3
Col1a2Q01149 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Col1a2Q01149 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Col1a2Q01149 Snora73a-201ENSMUST00000082453 205 ntBASIC16.94■□□□□ 0.3
Col1a2Q01149 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col1a2Q01149 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col1a2Q01149 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col1a2Q01149 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col1a2Q01149 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col1a2Q01149 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col1a2Q01149 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col1a2Q01149 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col1a2Q01149 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col1a2Q01149 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col1a2Q01149 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col1a2Q01149 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col1a2Q01149 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col1a2Q01149 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col1a2Q01149 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col1a2Q01149 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Col1a2Q01149 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col1a2Q01149 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Col1a2Q01149 Gm15198-201ENSMUST00000117283 177 ntBASIC16.93■□□□□ 0.3
Col1a2Q01149 Gm11978-201ENSMUST00000122315 466 ntBASIC16.93■□□□□ 0.3
Col1a2Q01149 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC16.93■□□□□ 0.3
Col1a2Q01149 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC16.93■□□□□ 0.3
Col1a2Q01149 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col1a2Q01149 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC16.93■□□□□ 0.3
Col1a2Q01149 Gm43118-201ENSMUST00000199149 775 ntBASIC16.93■□□□□ 0.3
Col1a2Q01149 AC134254.1-201ENSMUST00000221362 167 ntBASIC16.93■□□□□ 0.3
Col1a2Q01149 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col1a2Q01149 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col1a2Q01149 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col1a2Q01149 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col1a2Q01149 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col1a2Q01149 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col1a2Q01149 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Col1a2Q01149 Tmed9-203ENSMUST00000224741 1450 ntBASIC16.93■□□□□ 0.3
Col1a2Q01149 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col1a2Q01149 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col1a2Q01149 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col1a2Q01149 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col1a2Q01149 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC16.93■□□□□ 0.3
Col1a2Q01149 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC16.93■□□□□ 0.3
Col1a2Q01149 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col1a2Q01149 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col1a2Q01149 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Col1a2Q01149 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col1a2Q01149 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col1a2Q01149 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col1a2Q01149 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col1a2Q01149 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col1a2Q01149 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col1a2Q01149 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col1a2Q01149 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC16.92■□□□□ 0.3
Col1a2Q01149 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Col1a2Q01149 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC16.92■□□□□ 0.3
Col1a2Q01149 Gm44974-201ENSMUST00000206387 1279 ntBASIC16.92■□□□□ 0.3
Col1a2Q01149 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col1a2Q01149 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col1a2Q01149 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Col1a2Q01149 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col1a2Q01149 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col1a2Q01149 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col1a2Q01149 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col1a2Q01149 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col1a2Q01149 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col1a2Q01149 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Col1a2Q01149 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col1a2Q01149 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col1a2Q01149 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col1a2Q01149 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col1a2Q01149 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col1a2Q01149 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col1a2Q01149 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col1a2Q01149 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Col1a2Q01149 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col1a2Q01149 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col1a2Q01149 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col1a2Q01149 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col1a2Q01149 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Col1a2Q01149 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Col1a2Q01149 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Col1a2Q01149 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Col1a2Q01149 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col1a2Q01149 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col1a2Q01149 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col1a2Q01149 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col1a2Q01149 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col1a2Q01149 Gm16479-201ENSMUST00000121706 932 ntBASIC16.91■□□□□ 0.3
Col1a2Q01149 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Col1a2Q01149 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC16.91■□□□□ 0.3
Col1a2Q01149 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Col1a2Q01149 Gm17823-201ENSMUST00000217830 1006 ntBASIC16.91■□□□□ 0.3
Col1a2Q01149 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col1a2Q01149 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col1a2Q01149 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Col1a2Q01149 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Col1a2Q01149 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms