Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn1bP97952 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Scn1bP97952 Gm42670-201ENSMUST00000201816 1292 ntBASIC12.46□□□□□ -0.41
Scn1bP97952 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.46□□□□□ -0.41
Scn1bP97952 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
Scn1bP97952 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.46□□□□□ -0.41
Scn1bP97952 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Scn1bP97952 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Scn1bP97952 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.46□□□□□ -0.41
Scn1bP97952 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn1bP97952 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn1bP97952 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Scn1bP97952 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Scn1bP97952 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.46□□□□□ -0.42
Scn1bP97952 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Scn1bP97952 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Scn1bP97952 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Scn1bP97952 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Scn1bP97952 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Scn1bP97952 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Scn1bP97952 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Scn1bP97952 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Scn1bP97952 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Scn1bP97952 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn1bP97952 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn1bP97952 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn1bP97952 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.45□□□□□ -0.42
Scn1bP97952 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Scn1bP97952 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn1bP97952 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn1bP97952 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn1bP97952 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Scn1bP97952 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.45□□□□□ -0.42
Scn1bP97952 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Scn1bP97952 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.45□□□□□ -0.42
Scn1bP97952 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Scn1bP97952 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn1bP97952 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Scn1bP97952 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn1bP97952 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Scn1bP97952 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Scn1bP97952 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Scn1bP97952 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Scn1bP97952 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Scn1bP97952 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Scn1bP97952 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn1bP97952 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Scn1bP97952 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn1bP97952 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Scn1bP97952 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Scn1bP97952 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn1bP97952 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Scn1bP97952 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Scn1bP97952 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Scn1bP97952 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn1bP97952 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Scn1bP97952 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.44□□□□□ -0.42
Scn1bP97952 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.44□□□□□ -0.42
Scn1bP97952 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Scn1bP97952 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn1bP97952 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn1bP97952 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn1bP97952 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn1bP97952 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn1bP97952 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.44□□□□□ -0.42
Scn1bP97952 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.44□□□□□ -0.42
Scn1bP97952 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Scn1bP97952 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Scn1bP97952 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Scn1bP97952 Gm27300-201ENSMUST00000184085 97 ntBASIC12.44□□□□□ -0.42
Scn1bP97952 Gm27335-201ENSMUST00000184758 97 ntBASIC12.44□□□□□ -0.42
Scn1bP97952 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.44□□□□□ -0.42
Scn1bP97952 Gm2651-201ENSMUST00000203560 838 ntBASIC12.44□□□□□ -0.42
Scn1bP97952 Gm45747-201ENSMUST00000212203 999 ntBASIC12.44□□□□□ -0.42
Scn1bP97952 AC138767.1-201ENSMUST00000222661 415 ntBASIC12.44□□□□□ -0.42
Scn1bP97952 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC12.44□□□□□ -0.42
Scn1bP97952 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn1bP97952 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.44□□□□□ -0.42
Scn1bP97952 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn1bP97952 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn1bP97952 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn1bP97952 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn1bP97952 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Scn1bP97952 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.44□□□□□ -0.42
Scn1bP97952 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.44□□□□□ -0.42
Scn1bP97952 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Scn1bP97952 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.44□□□□□ -0.42
Scn1bP97952 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn1bP97952 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn1bP97952 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scn1bP97952 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1bP97952 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1bP97952 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1bP97952 Syt7-205ENSMUST00000224135 1557 ntBASIC12.43□□□□□ -0.42
Scn1bP97952 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1bP97952 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1bP97952 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Scn1bP97952 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1bP97952 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scn1bP97952 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms