Protein–RNA interactions for Protein: P86793

Ccl21c, C-C motif chemokine 21c, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl21cP86793 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl21cP86793 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl21cP86793 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Ccl21cP86793 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl21cP86793 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl21cP86793 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Ccl21cP86793 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC11.28□□□□□ -0.6
Ccl21cP86793 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Ccl21cP86793 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.28□□□□□ -0.6
Ccl21cP86793 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ccl21cP86793 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccl21cP86793 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.28□□□□□ -0.6
Ccl21cP86793 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl21cP86793 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl21cP86793 Gm26185-201ENSMUST00000157692 266 ntBASIC11.28□□□□□ -0.6
Ccl21cP86793 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.28□□□□□ -0.6
Ccl21cP86793 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ccl21cP86793 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl21cP86793 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl21cP86793 Gm37042-201ENSMUST00000193816 581 ntBASIC11.28□□□□□ -0.6
Ccl21cP86793 Gm31256-201ENSMUST00000194705 506 ntBASIC11.28□□□□□ -0.6
Ccl21cP86793 Gm8099-201ENSMUST00000200510 742 ntBASIC11.28□□□□□ -0.6
Ccl21cP86793 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl21cP86793 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.28□□□□□ -0.6
Ccl21cP86793 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl21cP86793 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl21cP86793 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl21cP86793 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl21cP86793 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Ccl21cP86793 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl21cP86793 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl21cP86793 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl21cP86793 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl21cP86793 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl21cP86793 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ccl21cP86793 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl21cP86793 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl21cP86793 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ccl21cP86793 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl21cP86793 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl21cP86793 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.28□□□□□ -0.6
Ccl21cP86793 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl21cP86793 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl21cP86793 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl21cP86793 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl21cP86793 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccl21cP86793 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Ccl21cP86793 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC11.27□□□□□ -0.6
Ccl21cP86793 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Ccl21cP86793 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccl21cP86793 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Ccl21cP86793 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC11.27□□□□□ -0.6
Ccl21cP86793 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccl21cP86793 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.27□□□□□ -0.6
Ccl21cP86793 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccl21cP86793 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccl21cP86793 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl21cP86793 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.27□□□□□ -0.61
Ccl21cP86793 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Ccl21cP86793 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl21cP86793 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.27□□□□□ -0.61
Ccl21cP86793 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl21cP86793 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl21cP86793 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl21cP86793 Gm11637-201ENSMUST00000120601 592 ntBASIC11.27□□□□□ -0.61
Ccl21cP86793 Gm12363-201ENSMUST00000122250 668 ntBASIC11.27□□□□□ -0.61
Ccl21cP86793 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl21cP86793 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.27□□□□□ -0.61
Ccl21cP86793 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl21cP86793 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.27□□□□□ -0.61
Ccl21cP86793 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.27□□□□□ -0.61
Ccl21cP86793 Gm44967-201ENSMUST00000207047 631 ntBASIC11.27□□□□□ -0.61
Ccl21cP86793 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.27□□□□□ -0.61
Ccl21cP86793 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.27□□□□□ -0.61
Ccl21cP86793 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.27□□□□□ -0.61
Ccl21cP86793 CT009718.3-201ENSMUST00000221116 367 ntBASIC11.27□□□□□ -0.61
Ccl21cP86793 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl21cP86793 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Ccl21cP86793 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.27□□□□□ -0.61
Ccl21cP86793 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Ccl21cP86793 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl21cP86793 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl21cP86793 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl21cP86793 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Ccl21cP86793 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl21cP86793 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.27□□□□□ -0.61
Ccl21cP86793 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl21cP86793 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl21cP86793 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Ccl21cP86793 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Ccl21cP86793 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Ccl21cP86793 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl21cP86793 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl21cP86793 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl21cP86793 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl21cP86793 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl21cP86793 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl21cP86793 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.26□□□□□ -0.61
Ccl21cP86793 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl21cP86793 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms