Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43bP86448 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43bP86448 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43bP86448 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43bP86448 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43bP86448 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43bP86448 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.05□□□□□ -0.16
Trim43bP86448 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43bP86448 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43bP86448 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.05□□□□□ -0.16
Trim43bP86448 Gm13823-201ENSMUST00000119930 345 ntBASIC14.05□□□□□ -0.16
Trim43bP86448 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Trim43bP86448 Gm17837-201ENSMUST00000186435 985 ntBASIC14.05□□□□□ -0.16
Trim43bP86448 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trim43bP86448 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.05□□□□□ -0.16
Trim43bP86448 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.05□□□□□ -0.16
Trim43bP86448 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.05□□□□□ -0.16
Trim43bP86448 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trim43bP86448 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43bP86448 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43bP86448 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43bP86448 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43bP86448 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43bP86448 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.05□□□□□ -0.16
Trim43bP86448 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43bP86448 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43bP86448 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trim43bP86448 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43bP86448 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43bP86448 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.05□□□□□ -0.16
Trim43bP86448 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Trim43bP86448 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43bP86448 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43bP86448 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43bP86448 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43bP86448 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43bP86448 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43bP86448 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43bP86448 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43bP86448 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43bP86448 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43bP86448 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43bP86448 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43bP86448 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43bP86448 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43bP86448 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43bP86448 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43bP86448 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trim43bP86448 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43bP86448 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43bP86448 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.04□□□□□ -0.16
Trim43bP86448 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43bP86448 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43bP86448 Gm15653-201ENSMUST00000119247 907 ntBASIC14.04□□□□□ -0.16
Trim43bP86448 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43bP86448 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.04□□□□□ -0.16
Trim43bP86448 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.04□□□□□ -0.16
Trim43bP86448 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.04□□□□□ -0.16
Trim43bP86448 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43bP86448 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.04□□□□□ -0.16
Trim43bP86448 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43bP86448 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43bP86448 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43bP86448 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trim43bP86448 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43bP86448 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43bP86448 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43bP86448 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Trim43bP86448 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43bP86448 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trim43bP86448 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.04□□□□□ -0.16
Trim43bP86448 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.04□□□□□ -0.16
Trim43bP86448 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43bP86448 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43bP86448 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43bP86448 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43bP86448 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43bP86448 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43bP86448 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trim43bP86448 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43bP86448 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43bP86448 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43bP86448 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43bP86448 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43bP86448 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43bP86448 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43bP86448 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43bP86448 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43bP86448 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43bP86448 Gm27680-201ENSMUST00000184192 160 ntBASIC14.03□□□□□ -0.16
Trim43bP86448 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43bP86448 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43bP86448 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43bP86448 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43bP86448 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.03□□□□□ -0.16
Trim43bP86448 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trim43bP86448 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trim43bP86448 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43bP86448 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trim43bP86448 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms