Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
H3f3aP84244 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
H3f3aP84244 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.47
H3f3aP84244 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
H3f3aP84244 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
H3f3aP84244 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
H3f3aP84244 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.15□□□□□ -0.47
H3f3aP84244 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
H3f3aP84244 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
H3f3aP84244 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H3f3aP84244 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
H3f3aP84244 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H3f3aP84244 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
H3f3aP84244 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
H3f3aP84244 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
H3f3aP84244 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.14□□□□□ -0.47
H3f3aP84244 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
H3f3aP84244 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H3f3aP84244 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
H3f3aP84244 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H3f3aP84244 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
H3f3aP84244 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.14□□□□□ -0.47
H3f3aP84244 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
H3f3aP84244 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.14□□□□□ -0.47
H3f3aP84244 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H3f3aP84244 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
H3f3aP84244 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H3f3aP84244 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H3f3aP84244 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.14□□□□□ -0.47
H3f3aP84244 Gm11524-201ENSMUST00000119349 807 ntBASIC12.14□□□□□ -0.47
H3f3aP84244 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
H3f3aP84244 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.14□□□□□ -0.47
H3f3aP84244 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
H3f3aP84244 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.14□□□□□ -0.47
H3f3aP84244 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H3f3aP84244 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
H3f3aP84244 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H3f3aP84244 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H3f3aP84244 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H3f3aP84244 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.14□□□□□ -0.47
H3f3aP84244 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
H3f3aP84244 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.14□□□□□ -0.47
H3f3aP84244 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
H3f3aP84244 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
H3f3aP84244 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.14□□□□□ -0.47
H3f3aP84244 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H3f3aP84244 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H3f3aP84244 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H3f3aP84244 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
H3f3aP84244 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H3f3aP84244 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H3f3aP84244 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H3f3aP84244 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
H3f3aP84244 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H3f3aP84244 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.14□□□□□ -0.47
H3f3aP84244 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
H3f3aP84244 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
H3f3aP84244 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H3f3aP84244 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H3f3aP84244 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.14□□□□□ -0.47
H3f3aP84244 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
H3f3aP84244 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3aP84244 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3aP84244 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.13□□□□□ -0.47
H3f3aP84244 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3aP84244 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3aP84244 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3aP84244 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.13□□□□□ -0.47
H3f3aP84244 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3aP84244 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3aP84244 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
H3f3aP84244 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
H3f3aP84244 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3aP84244 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.13□□□□□ -0.47
H3f3aP84244 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3aP84244 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3aP84244 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3aP84244 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3aP84244 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.13□□□□□ -0.47
H3f3aP84244 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3aP84244 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3aP84244 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.13□□□□□ -0.47
H3f3aP84244 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.13□□□□□ -0.47
H3f3aP84244 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3aP84244 Gm26464-201ENSMUST00000157094 305 ntBASIC12.13□□□□□ -0.47
H3f3aP84244 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.13□□□□□ -0.47
H3f3aP84244 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3aP84244 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.13□□□□□ -0.47
H3f3aP84244 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.13□□□□□ -0.47
H3f3aP84244 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.13□□□□□ -0.47
H3f3aP84244 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.13□□□□□ -0.47
H3f3aP84244 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3aP84244 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
H3f3aP84244 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3aP84244 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3aP84244 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3aP84244 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.13□□□□□ -0.47
H3f3aP84244 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3aP84244 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
H3f3aP84244 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms