Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SgcaP82350 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SgcaP82350 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SgcaP82350 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SgcaP82350 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SgcaP82350 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SgcaP82350 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SgcaP82350 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.44□□□□□ -0.58
SgcaP82350 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SgcaP82350 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SgcaP82350 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
SgcaP82350 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
SgcaP82350 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SgcaP82350 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SgcaP82350 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SgcaP82350 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SgcaP82350 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.43□□□□□ -0.58
SgcaP82350 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC11.43□□□□□ -0.58
SgcaP82350 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcaP82350 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcaP82350 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcaP82350 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcaP82350 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcaP82350 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcaP82350 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcaP82350 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcaP82350 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
SgcaP82350 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcaP82350 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcaP82350 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SgcaP82350 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcaP82350 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcaP82350 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcaP82350 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SgcaP82350 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcaP82350 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcaP82350 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
SgcaP82350 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcaP82350 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.43□□□□□ -0.58
SgcaP82350 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcaP82350 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SgcaP82350 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcaP82350 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcaP82350 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SgcaP82350 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SgcaP82350 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SgcaP82350 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC11.43□□□□□ -0.58
SgcaP82350 Gm42670-201ENSMUST00000201816 1292 ntBASIC11.43□□□□□ -0.58
SgcaP82350 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC11.43□□□□□ -0.58
SgcaP82350 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC11.43□□□□□ -0.58
SgcaP82350 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC11.43□□□□□ -0.58
SgcaP82350 AV026068-213ENSMUST00000223675 1171 ntBASIC11.43□□□□□ -0.58
SgcaP82350 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcaP82350 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcaP82350 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcaP82350 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
SgcaP82350 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
SgcaP82350 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcaP82350 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcaP82350 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.43□□□□□ -0.58
SgcaP82350 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SgcaP82350 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcaP82350 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcaP82350 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SgcaP82350 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcaP82350 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SgcaP82350 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcaP82350 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcaP82350 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcaP82350 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SgcaP82350 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
SgcaP82350 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcaP82350 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SgcaP82350 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
SgcaP82350 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SgcaP82350 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
SgcaP82350 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
SgcaP82350 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
SgcaP82350 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SgcaP82350 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
SgcaP82350 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SgcaP82350 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SgcaP82350 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SgcaP82350 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SgcaP82350 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SgcaP82350 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SgcaP82350 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
SgcaP82350 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC11.42□□□□□ -0.58
SgcaP82350 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.42□□□□□ -0.58
SgcaP82350 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
SgcaP82350 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
SgcaP82350 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SgcaP82350 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SgcaP82350 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC11.42□□□□□ -0.58
SgcaP82350 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC11.42□□□□□ -0.58
SgcaP82350 Gm10459-201ENSMUST00000202708 1155 ntBASIC11.42□□□□□ -0.58
SgcaP82350 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
SgcaP82350 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
SgcaP82350 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC11.42□□□□□ -0.58
SgcaP82350 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms