Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SgcdP82347 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SgcdP82347 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
SgcdP82347 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SgcdP82347 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SgcdP82347 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SgcdP82347 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SgcdP82347 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SgcdP82347 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
SgcdP82347 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SgcdP82347 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SgcdP82347 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.68□□□□□ -0.38
SgcdP82347 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SgcdP82347 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
SgcdP82347 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SgcdP82347 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SgcdP82347 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SgcdP82347 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcdP82347 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcdP82347 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SgcdP82347 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcdP82347 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SgcdP82347 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcdP82347 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SgcdP82347 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcdP82347 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.67□□□□□ -0.38
SgcdP82347 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SgcdP82347 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
SgcdP82347 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcdP82347 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcdP82347 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SgcdP82347 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SgcdP82347 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcdP82347 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
SgcdP82347 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SgcdP82347 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcdP82347 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcdP82347 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SgcdP82347 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.67□□□□□ -0.38
SgcdP82347 Gm11745-201ENSMUST00000121669 448 ntBASIC12.67□□□□□ -0.38
SgcdP82347 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SgcdP82347 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.67□□□□□ -0.38
SgcdP82347 Rprl2-201ENSMUST00000157150 290 ntBASIC12.67□□□□□ -0.38
SgcdP82347 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcdP82347 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SgcdP82347 Gm25948-201ENSMUST00000175334 112 ntBASIC12.67□□□□□ -0.38
SgcdP82347 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.67□□□□□ -0.38
SgcdP82347 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcdP82347 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SgcdP82347 Gm9182-201ENSMUST00000217829 639 ntBASIC12.67□□□□□ -0.38
SgcdP82347 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.67□□□□□ -0.38
SgcdP82347 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcdP82347 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
SgcdP82347 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcdP82347 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
SgcdP82347 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcdP82347 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcdP82347 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcdP82347 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcdP82347 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
SgcdP82347 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
SgcdP82347 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcdP82347 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcdP82347 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcdP82347 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcdP82347 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SgcdP82347 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SgcdP82347 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SgcdP82347 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SgcdP82347 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcdP82347 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcdP82347 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcdP82347 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SgcdP82347 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.67□□□□□ -0.38
SgcdP82347 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcdP82347 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcdP82347 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcdP82347 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
SgcdP82347 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.66□□□□□ -0.38
SgcdP82347 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.66□□□□□ -0.38
SgcdP82347 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcdP82347 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SgcdP82347 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcdP82347 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.66□□□□□ -0.38
SgcdP82347 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcdP82347 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.66□□□□□ -0.38
SgcdP82347 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcdP82347 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.66□□□□□ -0.38
SgcdP82347 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcdP82347 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.66□□□□□ -0.38
SgcdP82347 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.66□□□□□ -0.38
SgcdP82347 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.66□□□□□ -0.38
SgcdP82347 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.66□□□□□ -0.38
SgcdP82347 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
SgcdP82347 Gm5177-201ENSMUST00000183092 997 ntBASIC12.66□□□□□ -0.38
SgcdP82347 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SgcdP82347 Gm45747-201ENSMUST00000212203 999 ntBASIC12.66□□□□□ -0.38
SgcdP82347 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.66□□□□□ -0.38
SgcdP82347 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
SgcdP82347 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms