Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.99□□□□□ -0.49
Lsm6P62313 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC11.99□□□□□ -0.49
Lsm6P62313 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC11.99□□□□□ -0.49
Lsm6P62313 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm6P62313 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.99□□□□□ -0.49
Lsm6P62313 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.99□□□□□ -0.49
Lsm6P62313 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm6P62313 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm6P62313 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC11.99□□□□□ -0.49
Lsm6P62313 Gm5867-201ENSMUST00000063197 592 ntBASIC11.99□□□□□ -0.49
Lsm6P62313 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC11.99□□□□□ -0.49
Lsm6P62313 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11.99□□□□□ -0.49
Lsm6P62313 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm6P62313 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm6P62313 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.99□□□□□ -0.49
Lsm6P62313 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm6P62313 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm6P62313 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm6P62313 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm6P62313 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Lsm6P62313 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm6P62313 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm6P62313 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm6P62313 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm6P62313 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.99□□□□□ -0.49
Lsm6P62313 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.99□□□□□ -0.49
Lsm6P62313 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Lsm6P62313 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Lsm6P62313 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11.98□□□□□ -0.49
Lsm6P62313 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm6P62313 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm6P62313 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm6P62313 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm6P62313 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm6P62313 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm6P62313 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Lsm6P62313 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.98□□□□□ -0.49
Lsm6P62313 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm6P62313 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Lsm6P62313 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm6P62313 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm6P62313 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Lsm6P62313 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm6P62313 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm6P62313 Gm14452-201ENSMUST00000118680 1632 ntBASIC11.98□□□□□ -0.49
Lsm6P62313 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm6P62313 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Lsm6P62313 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Lsm6P62313 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Lsm6P62313 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm6P62313 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm6P62313 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.98□□□□□ -0.49
Lsm6P62313 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm6P62313 Gm27989-201ENSMUST00000184721 107 ntBASIC11.98□□□□□ -0.49
Lsm6P62313 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.98□□□□□ -0.49
Lsm6P62313 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Lsm6P62313 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Lsm6P62313 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm6P62313 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm6P62313 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Lsm6P62313 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm6P62313 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm6P62313 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm6P62313 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm6P62313 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Lsm6P62313 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm6P62313 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm6P62313 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm6P62313 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm6P62313 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.98□□□□□ -0.49
Lsm6P62313 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.98□□□□□ -0.49
Lsm6P62313 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm6P62313 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm6P62313 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm6P62313 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.97□□□□□ -0.49
Lsm6P62313 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm6P62313 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm6P62313 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm6P62313 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Lsm6P62313 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm6P62313 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm6P62313 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.97□□□□□ -0.49
Lsm6P62313 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm6P62313 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm6P62313 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.97□□□□□ -0.49
Lsm6P62313 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Lsm6P62313 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.97□□□□□ -0.49
Lsm6P62313 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.97□□□□□ -0.49
Lsm6P62313 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Lsm6P62313 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.97□□□□□ -0.49
Lsm6P62313 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.97□□□□□ -0.49
Lsm6P62313 Gm15770-201ENSMUST00000117498 584 ntBASIC11.97□□□□□ -0.49
Lsm6P62313 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Lsm6P62313 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC11.97□□□□□ -0.49
Lsm6P62313 Mir7684-201ENSMUST00000183858 60 ntBASIC11.97□□□□□ -0.49
Lsm6P62313 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC11.97□□□□□ -0.49
Lsm6P62313 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm6P62313 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm6P62313 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm6P62313 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms