Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a1P61620 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.05□□□□□ -0.48
Sec61a1P61620 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a1P61620 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a1P61620 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a1P61620 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Sec61a1P61620 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a1P61620 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a1P61620 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a1P61620 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.05□□□□□ -0.48
Sec61a1P61620 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a1P61620 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a1P61620 Gm20949-201ENSMUST00000206478 952 ntBASIC12.05□□□□□ -0.48
Sec61a1P61620 Gm18049-201ENSMUST00000208909 581 ntBASIC12.05□□□□□ -0.48
Sec61a1P61620 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.05□□□□□ -0.48
Sec61a1P61620 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.05□□□□□ -0.48
Sec61a1P61620 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a1P61620 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Sec61a1P61620 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a1P61620 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a1P61620 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.05□□□□□ -0.48
Sec61a1P61620 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a1P61620 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a1P61620 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a1P61620 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Sec61a1P61620 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a1P61620 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a1P61620 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.05□□□□□ -0.48
Sec61a1P61620 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Sec61a1P61620 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a1P61620 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a1P61620 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61a1P61620 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sec61a1P61620 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sec61a1P61620 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sec61a1P61620 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sec61a1P61620 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sec61a1P61620 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sec61a1P61620 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.04□□□□□ -0.48
Sec61a1P61620 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sec61a1P61620 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sec61a1P61620 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sec61a1P61620 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sec61a1P61620 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sec61a1P61620 Gm8410-201ENSMUST00000117225 605 ntBASIC12.04□□□□□ -0.48
Sec61a1P61620 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.04□□□□□ -0.48
Sec61a1P61620 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.04□□□□□ -0.48
Sec61a1P61620 Gm27618-201ENSMUST00000183671 60 ntBASIC12.04□□□□□ -0.48
Sec61a1P61620 Gm27622-201ENSMUST00000183779 60 ntBASIC12.04□□□□□ -0.48
Sec61a1P61620 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.04□□□□□ -0.48
Sec61a1P61620 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.04□□□□□ -0.48
Sec61a1P61620 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sec61a1P61620 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sec61a1P61620 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.04□□□□□ -0.48
Sec61a1P61620 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sec61a1P61620 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.04□□□□□ -0.48
Sec61a1P61620 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sec61a1P61620 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sec61a1P61620 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sec61a1P61620 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Sec61a1P61620 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Sec61a1P61620 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sec61a1P61620 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Sec61a1P61620 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sec61a1P61620 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sec61a1P61620 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sec61a1P61620 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.03□□□□□ -0.48
Sec61a1P61620 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61a1P61620 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61a1P61620 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.03□□□□□ -0.48
Sec61a1P61620 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61a1P61620 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.03□□□□□ -0.48
Sec61a1P61620 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Sec61a1P61620 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61a1P61620 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.03□□□□□ -0.48
Sec61a1P61620 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61a1P61620 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Sec61a1P61620 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.03□□□□□ -0.48
Sec61a1P61620 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Sec61a1P61620 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Sec61a1P61620 Gm15693-201ENSMUST00000120470 637 ntBASIC12.03□□□□□ -0.48
Sec61a1P61620 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Sec61a1P61620 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61a1P61620 Gm45098-201ENSMUST00000207179 657 ntBASIC12.03□□□□□ -0.48
Sec61a1P61620 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.03□□□□□ -0.48
Sec61a1P61620 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61a1P61620 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61a1P61620 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61a1P61620 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.03□□□□□ -0.48
Sec61a1P61620 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61a1P61620 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Sec61a1P61620 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61a1P61620 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61a1P61620 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61a1P61620 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61a1P61620 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61a1P61620 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61a1P61620 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Sec61a1P61620 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Sec61a1P61620 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms