Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Cks1bP61025 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1bP61025 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cks1bP61025 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cks1bP61025 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC9.74□□□□□ -0.85
Cks1bP61025 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC9.74□□□□□ -0.85
Cks1bP61025 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cks1bP61025 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Cks1bP61025 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC9.74□□□□□ -0.85
Cks1bP61025 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cks1bP61025 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cks1bP61025 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cks1bP61025 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cks1bP61025 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cks1bP61025 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC9.74□□□□□ -0.85
Cks1bP61025 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cks1bP61025 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cks1bP61025 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Cks1bP61025 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC9.74□□□□□ -0.85
Cks1bP61025 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Cks1bP61025 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Cks1bP61025 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cks1bP61025 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Cks1bP61025 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC9.74□□□□□ -0.85
Cks1bP61025 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cks1bP61025 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC9.74□□□□□ -0.85
Cks1bP61025 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cks1bP61025 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cks1bP61025 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Cks1bP61025 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Cks1bP61025 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Cks1bP61025 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cks1bP61025 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC9.74□□□□□ -0.85
Cks1bP61025 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC9.74□□□□□ -0.85
Cks1bP61025 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Cks1bP61025 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cks1bP61025 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC9.74□□□□□ -0.85
Cks1bP61025 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cks1bP61025 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cks1bP61025 Gm18246-201ENSMUST00000221023 728 ntBASIC9.74□□□□□ -0.85
Cks1bP61025 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cks1bP61025 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cks1bP61025 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Cks1bP61025 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cks1bP61025 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cks1bP61025 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
Cks1bP61025 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Cks1bP61025 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cks1bP61025 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Cks1bP61025 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cks1bP61025 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cks1bP61025 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cks1bP61025 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC9.74□□□□□ -0.85
Cks1bP61025 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cks1bP61025 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cks1bP61025 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cks1bP61025 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cks1bP61025 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC9.74□□□□□ -0.85
Cks1bP61025 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cks1bP61025 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Cks1bP61025 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Cks1bP61025 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Cks1bP61025 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cks1bP61025 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cks1bP61025 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Cks1bP61025 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cks1bP61025 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cks1bP61025 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cks1bP61025 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cks1bP61025 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC9.73□□□□□ -0.85
Cks1bP61025 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cks1bP61025 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cks1bP61025 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cks1bP61025 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cks1bP61025 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Cks1bP61025 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cks1bP61025 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cks1bP61025 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
Cks1bP61025 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Cks1bP61025 AC123738.2-201ENSMUST00000223791 1899 ntBASIC9.73□□□□□ -0.85
Cks1bP61025 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cks1bP61025 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cks1bP61025 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cks1bP61025 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC9.73□□□□□ -0.85
Cks1bP61025 Gm14042-201ENSMUST00000120139 833 ntBASIC9.73□□□□□ -0.85
Cks1bP61025 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Cks1bP61025 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cks1bP61025 Gm6944-201ENSMUST00000182449 1006 ntBASIC9.73□□□□□ -0.85
Cks1bP61025 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC9.73□□□□□ -0.85
Cks1bP61025 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Cks1bP61025 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC9.73□□□□□ -0.85
Cks1bP61025 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cks1bP61025 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cks1bP61025 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cks1bP61025 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cks1bP61025 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
Cks1bP61025 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC9.73□□□□□ -0.85
Cks1bP61025 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Cks1bP61025 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cks1bP61025 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms