Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.89□□□□□ -0.35
Nup43P59235 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup43P59235 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup43P59235 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup43P59235 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nup43P59235 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nup43P59235 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup43P59235 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.89□□□□□ -0.35
Nup43P59235 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup43P59235 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup43P59235 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.89□□□□□ -0.35
Nup43P59235 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup43P59235 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup43P59235 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup43P59235 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.88□□□□□ -0.35
Nup43P59235 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup43P59235 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Nup43P59235 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup43P59235 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup43P59235 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup43P59235 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup43P59235 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Nup43P59235 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup43P59235 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup43P59235 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup43P59235 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Nup43P59235 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup43P59235 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup43P59235 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup43P59235 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.88□□□□□ -0.35
Nup43P59235 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.88□□□□□ -0.35
Nup43P59235 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Nup43P59235 Acot6-202ENSMUST00000222921 3622 ntBASIC12.88□□□□□ -0.35
Nup43P59235 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Nup43P59235 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.88□□□□□ -0.35
Nup43P59235 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.88□□□□□ -0.35
Nup43P59235 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.88□□□□□ -0.35
Nup43P59235 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nup43P59235 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup43P59235 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.88□□□□□ -0.35
Nup43P59235 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.88□□□□□ -0.35
Nup43P59235 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.88□□□□□ -0.35
Nup43P59235 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nup43P59235 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.88□□□□□ -0.35
Nup43P59235 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup43P59235 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Nup43P59235 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup43P59235 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nup43P59235 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Nup43P59235 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nup43P59235 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Nup43P59235 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup43P59235 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nup43P59235 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup43P59235 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup43P59235 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup43P59235 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup43P59235 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup43P59235 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup43P59235 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup43P59235 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Nup43P59235 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nup43P59235 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup43P59235 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup43P59235 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.88□□□□□ -0.35
Nup43P59235 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup43P59235 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.87□□□□□ -0.35
Nup43P59235 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup43P59235 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Nup43P59235 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Nup43P59235 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup43P59235 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nup43P59235 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup43P59235 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup43P59235 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.87□□□□□ -0.35
Nup43P59235 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup43P59235 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nup43P59235 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup43P59235 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup43P59235 Gm11524-201ENSMUST00000119349 807 ntBASIC12.87□□□□□ -0.35
Nup43P59235 Gm12485-201ENSMUST00000119641 291 ntBASIC12.87□□□□□ -0.35
Nup43P59235 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup43P59235 Gm37917-201ENSMUST00000194711 392 ntBASIC12.87□□□□□ -0.35
Nup43P59235 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.87□□□□□ -0.35
Nup43P59235 Gm19078-201ENSMUST00000206311 727 ntBASIC12.87□□□□□ -0.35
Nup43P59235 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup43P59235 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Nup43P59235 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Nup43P59235 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup43P59235 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nup43P59235 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup43P59235 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Nup43P59235 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup43P59235 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup43P59235 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup43P59235 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup43P59235 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nup43P59235 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.87□□□□□ -0.35
Nup43P59235 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup43P59235 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms