Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubgcp3P58854 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubgcp3P58854 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tubgcp3P58854 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubgcp3P58854 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubgcp3P58854 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tubgcp3P58854 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubgcp3P58854 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubgcp3P58854 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tubgcp3P58854 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tubgcp3P58854 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Tubgcp3P58854 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubgcp3P58854 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubgcp3P58854 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubgcp3P58854 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubgcp3P58854 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.94□□□□□ -0.18
Tubgcp3P58854 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tubgcp3P58854 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tubgcp3P58854 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubgcp3P58854 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tubgcp3P58854 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubgcp3P58854 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubgcp3P58854 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.94□□□□□ -0.18
Tubgcp3P58854 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubgcp3P58854 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubgcp3P58854 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.94□□□□□ -0.18
Tubgcp3P58854 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.94□□□□□ -0.18
Tubgcp3P58854 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubgcp3P58854 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.94□□□□□ -0.18
Tubgcp3P58854 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubgcp3P58854 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Tubgcp3P58854 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Tubgcp3P58854 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.94□□□□□ -0.18
Tubgcp3P58854 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Tubgcp3P58854 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Tubgcp3P58854 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tubgcp3P58854 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubgcp3P58854 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Tubgcp3P58854 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubgcp3P58854 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubgcp3P58854 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubgcp3P58854 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubgcp3P58854 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubgcp3P58854 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubgcp3P58854 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubgcp3P58854 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tubgcp3P58854 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Tubgcp3P58854 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tubgcp3P58854 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Tubgcp3P58854 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.93□□□□□ -0.18
Tubgcp3P58854 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tubgcp3P58854 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Tubgcp3P58854 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tubgcp3P58854 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Tubgcp3P58854 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tubgcp3P58854 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Tubgcp3P58854 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tubgcp3P58854 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Tubgcp3P58854 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tubgcp3P58854 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.93□□□□□ -0.18
Tubgcp3P58854 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Tubgcp3P58854 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.93□□□□□ -0.18
Tubgcp3P58854 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tubgcp3P58854 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Tubgcp3P58854 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tubgcp3P58854 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Tubgcp3P58854 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.93□□□□□ -0.18
Tubgcp3P58854 Gm5425-201ENSMUST00000214125 459 ntBASIC13.93□□□□□ -0.18
Tubgcp3P58854 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Tubgcp3P58854 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tubgcp3P58854 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tubgcp3P58854 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tubgcp3P58854 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tubgcp3P58854 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tubgcp3P58854 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Tubgcp3P58854 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Tubgcp3P58854 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tubgcp3P58854 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tubgcp3P58854 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tubgcp3P58854 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tubgcp3P58854 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tubgcp3P58854 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tubgcp3P58854 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.93□□□□□ -0.18
Tubgcp3P58854 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tubgcp3P58854 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tubgcp3P58854 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tubgcp3P58854 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tubgcp3P58854 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tubgcp3P58854 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tubgcp3P58854 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tubgcp3P58854 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tubgcp3P58854 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Tubgcp3P58854 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tubgcp3P58854 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Tubgcp3P58854 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Tubgcp3P58854 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tubgcp3P58854 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Tubgcp3P58854 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.92□□□□□ -0.18
Tubgcp3P58854 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.92□□□□□ -0.18
Tubgcp3P58854 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms