Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rrp1P56183 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rrp1P56183 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.4■□□□□ 0.06
Rrp1P56183 Gm33320-201ENSMUST00000192232 530 ntBASIC15.4■□□□□ 0.06
Rrp1P56183 AC156016.3-201ENSMUST00000228623 344 ntBASIC15.4■□□□□ 0.06
Rrp1P56183 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rrp1P56183 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rrp1P56183 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rrp1P56183 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rrp1P56183 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rrp1P56183 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rrp1P56183 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rrp1P56183 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rrp1P56183 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rrp1P56183 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Rrp1P56183 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rrp1P56183 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rrp1P56183 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Rrp1P56183 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC15.4■□□□□ 0.06
Rrp1P56183 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Rrp1P56183 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Rrp1P56183 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC15.4■□□□□ 0.06
Rrp1P56183 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rrp1P56183 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rrp1P56183 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rrp1P56183 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rrp1P56183 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rrp1P56183 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rrp1P56183 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rrp1P56183 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rrp1P56183 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rrp1P56183 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rrp1P56183 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rrp1P56183 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Rrp1P56183 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rrp1P56183 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Rrp1P56183 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rrp1P56183 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Rrp1P56183 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Rrp1P56183 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Rrp1P56183 Gm14701-201ENSMUST00000117156 348 ntBASIC15.39■□□□□ 0.05
Rrp1P56183 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rrp1P56183 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.39■□□□□ 0.05
Rrp1P56183 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rrp1P56183 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
Rrp1P56183 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rrp1P56183 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.39■□□□□ 0.05
Rrp1P56183 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rrp1P56183 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Rrp1P56183 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Rrp1P56183 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rrp1P56183 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.39■□□□□ 0.05
Rrp1P56183 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rrp1P56183 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rrp1P56183 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rrp1P56183 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rrp1P56183 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rrp1P56183 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rrp1P56183 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Rrp1P56183 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rrp1P56183 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rrp1P56183 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC15.39■□□□□ 0.05
Rrp1P56183 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rrp1P56183 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rrp1P56183 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
Rrp1P56183 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rrp1P56183 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rrp1P56183 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rrp1P56183 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC15.38■□□□□ 0.05
Rrp1P56183 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rrp1P56183 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rrp1P56183 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rrp1P56183 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rrp1P56183 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rrp1P56183 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Rrp1P56183 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rrp1P56183 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rrp1P56183 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rrp1P56183 Gm22065-201ENSMUST00000103753 110 ntBASIC15.38■□□□□ 0.05
Rrp1P56183 Gm22066-201ENSMUST00000103761 110 ntBASIC15.38■□□□□ 0.05
Rrp1P56183 Gm24932-201ENSMUST00000103763 110 ntBASIC15.38■□□□□ 0.05
Rrp1P56183 Gm24115-201ENSMUST00000103799 110 ntBASIC15.38■□□□□ 0.05
Rrp1P56183 Gm22190-201ENSMUST00000103827 110 ntBASIC15.38■□□□□ 0.05
Rrp1P56183 Gm22191-201ENSMUST00000103831 110 ntBASIC15.38■□□□□ 0.05
Rrp1P56183 Gm24721-201ENSMUST00000103849 110 ntBASIC15.38■□□□□ 0.05
Rrp1P56183 Gm28018-201ENSMUST00000103869 110 ntBASIC15.38■□□□□ 0.05
Rrp1P56183 Gm26399-201ENSMUST00000103937 110 ntBASIC15.38■□□□□ 0.05
Rrp1P56183 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Rrp1P56183 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rrp1P56183 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rrp1P56183 Gm25349-201ENSMUST00000177728 110 ntBASIC15.38■□□□□ 0.05
Rrp1P56183 Gm23616-201ENSMUST00000177797 110 ntBASIC15.38■□□□□ 0.05
Rrp1P56183 Gm25871-201ENSMUST00000177816 110 ntBASIC15.38■□□□□ 0.05
Rrp1P56183 Gm24752-201ENSMUST00000178240 110 ntBASIC15.38■□□□□ 0.05
Rrp1P56183 Gm24496-201ENSMUST00000178287 110 ntBASIC15.38■□□□□ 0.05
Rrp1P56183 Gm25649-201ENSMUST00000178476 110 ntBASIC15.38■□□□□ 0.05
Rrp1P56183 Gm25548-201ENSMUST00000178681 110 ntBASIC15.38■□□□□ 0.05
Rrp1P56183 Gm23147-201ENSMUST00000178841 110 ntBASIC15.38■□□□□ 0.05
Rrp1P56183 Gm26095-201ENSMUST00000179270 110 ntBASIC15.38■□□□□ 0.05
Rrp1P56183 Gm22171-201ENSMUST00000179283 110 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms