Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Atxn1P54254 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Atxn1P54254 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Atxn1P54254 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Atxn1P54254 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Atxn1P54254 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Atxn1P54254 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.54□□□□□ -0.24
Atxn1P54254 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Atxn1P54254 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Atxn1P54254 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Atxn1P54254 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Atxn1P54254 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Atxn1P54254 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atxn1P54254 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atxn1P54254 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atxn1P54254 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atxn1P54254 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.53□□□□□ -0.24
Atxn1P54254 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atxn1P54254 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atxn1P54254 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Atxn1P54254 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atxn1P54254 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.53□□□□□ -0.24
Atxn1P54254 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.53□□□□□ -0.24
Atxn1P54254 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atxn1P54254 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atxn1P54254 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.53□□□□□ -0.24
Atxn1P54254 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atxn1P54254 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atxn1P54254 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atxn1P54254 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Atxn1P54254 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.53□□□□□ -0.24
Atxn1P54254 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atxn1P54254 Gm15240-201ENSMUST00000118156 720 ntBASIC13.53□□□□□ -0.24
Atxn1P54254 Gm13689-201ENSMUST00000119360 685 ntBASIC13.53□□□□□ -0.24
Atxn1P54254 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Atxn1P54254 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
Atxn1P54254 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atxn1P54254 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Atxn1P54254 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.53□□□□□ -0.24
Atxn1P54254 Gm43118-201ENSMUST00000199149 775 ntBASIC13.53□□□□□ -0.24
Atxn1P54254 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.53□□□□□ -0.24
Atxn1P54254 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC13.53□□□□□ -0.24
Atxn1P54254 AC155637.1-201ENSMUST00000218560 636 ntBASIC13.53□□□□□ -0.24
Atxn1P54254 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Atxn1P54254 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atxn1P54254 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atxn1P54254 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Atxn1P54254 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atxn1P54254 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Atxn1P54254 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atxn1P54254 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atxn1P54254 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Atxn1P54254 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Atxn1P54254 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atxn1P54254 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atxn1P54254 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Atxn1P54254 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Atxn1P54254 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Atxn1P54254 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Atxn1P54254 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Atxn1P54254 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.52□□□□□ -0.24
Atxn1P54254 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Atxn1P54254 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Atxn1P54254 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Atxn1P54254 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Atxn1P54254 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.52□□□□□ -0.24
Atxn1P54254 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Atxn1P54254 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Atxn1P54254 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Atxn1P54254 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Atxn1P54254 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.52□□□□□ -0.25
Atxn1P54254 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.52□□□□□ -0.25
Atxn1P54254 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.52□□□□□ -0.25
Atxn1P54254 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Atxn1P54254 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.52□□□□□ -0.25
Atxn1P54254 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.52□□□□□ -0.25
Atxn1P54254 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Atxn1P54254 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC13.52□□□□□ -0.25
Atxn1P54254 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC13.52□□□□□ -0.25
Atxn1P54254 Gm38341-201ENSMUST00000195357 515 ntBASIC13.52□□□□□ -0.25
Atxn1P54254 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Atxn1P54254 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.52□□□□□ -0.25
Atxn1P54254 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Atxn1P54254 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Atxn1P54254 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Atxn1P54254 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Atxn1P54254 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Atxn1P54254 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Atxn1P54254 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Atxn1P54254 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.52□□□□□ -0.25
Atxn1P54254 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Atxn1P54254 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.52□□□□□ -0.25
Atxn1P54254 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atxn1P54254 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atxn1P54254 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Atxn1P54254 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atxn1P54254 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Atxn1P54254 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Atxn1P54254 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.51□□□□□ -0.25
Atxn1P54254 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms