Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lbx1P52955 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.16□□□□□ -0.3
Lbx1P52955 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lbx1P52955 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lbx1P52955 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lbx1P52955 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lbx1P52955 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lbx1P52955 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lbx1P52955 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lbx1P52955 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Lbx1P52955 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lbx1P52955 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lbx1P52955 Gm10434-201ENSMUST00000101158 471 ntBASIC13.16□□□□□ -0.3
Lbx1P52955 Gm23270-201ENSMUST00000104055 131 ntBASIC13.16□□□□□ -0.3
Lbx1P52955 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lbx1P52955 Gm6335-201ENSMUST00000118081 1194 ntBASIC13.16□□□□□ -0.3
Lbx1P52955 Gm7816-201ENSMUST00000119884 1194 ntBASIC13.16□□□□□ -0.3
Lbx1P52955 Gm15542-201ENSMUST00000121585 1194 ntBASIC13.16□□□□□ -0.3
Lbx1P52955 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC13.16□□□□□ -0.3
Lbx1P52955 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lbx1P52955 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lbx1P52955 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Lbx1P52955 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Lbx1P52955 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC13.16□□□□□ -0.3
Lbx1P52955 Gm19166-201ENSMUST00000196041 1063 ntBASIC13.16□□□□□ -0.3
Lbx1P52955 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.16□□□□□ -0.3
Lbx1P52955 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
Lbx1P52955 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lbx1P52955 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lbx1P52955 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lbx1P52955 Gm8894-201ENSMUST00000074642 666 ntBASIC13.16□□□□□ -0.3
Lbx1P52955 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.16□□□□□ -0.3
Lbx1P52955 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lbx1P52955 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lbx1P52955 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lbx1P52955 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lbx1P52955 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.16□□□□□ -0.3
Lbx1P52955 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lbx1P52955 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.16□□□□□ -0.3
Lbx1P52955 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Lbx1P52955 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Lbx1P52955 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lbx1P52955 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lbx1P52955 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lbx1P52955 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lbx1P52955 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lbx1P52955 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.16□□□□□ -0.3
Lbx1P52955 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lbx1P52955 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lbx1P52955 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lbx1P52955 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lbx1P52955 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lbx1P52955 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lbx1P52955 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lbx1P52955 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lbx1P52955 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lbx1P52955 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Lbx1P52955 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lbx1P52955 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lbx1P52955 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lbx1P52955 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lbx1P52955 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lbx1P52955 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lbx1P52955 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Lbx1P52955 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lbx1P52955 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lbx1P52955 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lbx1P52955 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Lbx1P52955 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Lbx1P52955 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Lbx1P52955 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lbx1P52955 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lbx1P52955 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lbx1P52955 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lbx1P52955 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lbx1P52955 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lbx1P52955 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lbx1P52955 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Lbx1P52955 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.15□□□□□ -0.3
Lbx1P52955 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.15□□□□□ -0.3
Lbx1P52955 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Lbx1P52955 AC159376.1-201ENSMUST00000218504 630 ntBASIC13.15□□□□□ -0.3
Lbx1P52955 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC13.15□□□□□ -0.3
Lbx1P52955 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lbx1P52955 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Lbx1P52955 Gm10179-201ENSMUST00000086233 688 ntBASIC13.15□□□□□ -0.3
Lbx1P52955 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lbx1P52955 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lbx1P52955 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lbx1P52955 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.15□□□□□ -0.3
Lbx1P52955 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lbx1P52955 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lbx1P52955 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lbx1P52955 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lbx1P52955 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Lbx1P52955 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.31
Lbx1P52955 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Lbx1P52955 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lbx1P52955 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Lbx1P52955 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms