Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Pdx1P52946 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Pdx1P52946 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pdx1P52946 Gm27772-201ENSMUST00000184900 187 ntBASIC13.5□□□□□ -0.25
Pdx1P52946 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.5□□□□□ -0.25
Pdx1P52946 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdx1P52946 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdx1P52946 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pdx1P52946 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdx1P52946 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Pdx1P52946 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.5□□□□□ -0.25
Pdx1P52946 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdx1P52946 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Pdx1P52946 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdx1P52946 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pdx1P52946 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pdx1P52946 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Pdx1P52946 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdx1P52946 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdx1P52946 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pdx1P52946 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdx1P52946 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdx1P52946 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Pdx1P52946 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Pdx1P52946 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdx1P52946 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdx1P52946 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdx1P52946 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdx1P52946 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdx1P52946 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pdx1P52946 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdx1P52946 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Pdx1P52946 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Pdx1P52946 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.49□□□□□ -0.25
Pdx1P52946 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdx1P52946 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdx1P52946 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Pdx1P52946 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdx1P52946 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Pdx1P52946 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdx1P52946 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Pdx1P52946 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Pdx1P52946 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.49□□□□□ -0.25
Pdx1P52946 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Pdx1P52946 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.49□□□□□ -0.25
Pdx1P52946 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pdx1P52946 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.49□□□□□ -0.25
Pdx1P52946 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Pdx1P52946 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdx1P52946 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdx1P52946 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdx1P52946 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Pdx1P52946 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdx1P52946 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pdx1P52946 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Pdx1P52946 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdx1P52946 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdx1P52946 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdx1P52946 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.48□□□□□ -0.25
Pdx1P52946 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdx1P52946 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Pdx1P52946 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pdx1P52946 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdx1P52946 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdx1P52946 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.48□□□□□ -0.25
Pdx1P52946 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.48□□□□□ -0.25
Pdx1P52946 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pdx1P52946 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdx1P52946 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pdx1P52946 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdx1P52946 Gm12859-201ENSMUST00000117834 427 ntBASIC13.48□□□□□ -0.25
Pdx1P52946 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pdx1P52946 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.48□□□□□ -0.25
Pdx1P52946 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdx1P52946 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.48□□□□□ -0.25
Pdx1P52946 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pdx1P52946 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdx1P52946 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdx1P52946 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Pdx1P52946 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdx1P52946 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdx1P52946 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Pdx1P52946 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.48□□□□□ -0.25
Pdx1P52946 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdx1P52946 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdx1P52946 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdx1P52946 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pdx1P52946 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pdx1P52946 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pdx1P52946 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Pdx1P52946 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Pdx1P52946 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pdx1P52946 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pdx1P52946 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pdx1P52946 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pdx1P52946 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pdx1P52946 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pdx1P52946 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.47□□□□□ -0.25
Pdx1P52946 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pdx1P52946 Gm15770-201ENSMUST00000117498 584 ntBASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms