Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lhx3P50481 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Lhx3P50481 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Lhx3P50481 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Lhx3P50481 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lhx3P50481 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lhx3P50481 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lhx3P50481 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lhx3P50481 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lhx3P50481 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Lhx3P50481 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Lhx3P50481 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.79□□□□□ -0.2
Lhx3P50481 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Lhx3P50481 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Lhx3P50481 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Lhx3P50481 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx3P50481 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.78□□□□□ -0.2
Lhx3P50481 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx3P50481 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Lhx3P50481 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx3P50481 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx3P50481 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx3P50481 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx3P50481 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx3P50481 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.78□□□□□ -0.2
Lhx3P50481 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx3P50481 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx3P50481 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx3P50481 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.78□□□□□ -0.2
Lhx3P50481 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Lhx3P50481 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx3P50481 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.78□□□□□ -0.2
Lhx3P50481 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.78□□□□□ -0.2
Lhx3P50481 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Lhx3P50481 Gm9002-201ENSMUST00000178437 499 ntBASIC13.78□□□□□ -0.2
Lhx3P50481 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx3P50481 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx3P50481 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx3P50481 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx3P50481 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Lhx3P50481 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx3P50481 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx3P50481 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx3P50481 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx3P50481 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx3P50481 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Lhx3P50481 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx3P50481 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx3P50481 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx3P50481 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Lhx3P50481 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx3P50481 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx3P50481 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx3P50481 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx3P50481 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lhx3P50481 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.78□□□□□ -0.2
Lhx3P50481 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Lhx3P50481 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Lhx3P50481 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Lhx3P50481 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.77□□□□□ -0.21
Lhx3P50481 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lhx3P50481 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lhx3P50481 Gm11478-201ENSMUST00000117851 599 ntBASIC13.77□□□□□ -0.21
Lhx3P50481 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.77□□□□□ -0.21
Lhx3P50481 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lhx3P50481 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lhx3P50481 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lhx3P50481 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lhx3P50481 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lhx3P50481 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lhx3P50481 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lhx3P50481 Gm6244-201ENSMUST00000178732 841 ntBASIC13.77□□□□□ -0.21
Lhx3P50481 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lhx3P50481 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lhx3P50481 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lhx3P50481 Gm7287-201ENSMUST00000205267 602 ntBASIC13.77□□□□□ -0.21
Lhx3P50481 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Lhx3P50481 Gm5035-201ENSMUST00000215581 927 ntBASIC13.77□□□□□ -0.21
Lhx3P50481 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lhx3P50481 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lhx3P50481 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lhx3P50481 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.77□□□□□ -0.21
Lhx3P50481 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Lhx3P50481 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lhx3P50481 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lhx3P50481 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Lhx3P50481 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lhx3P50481 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lhx3P50481 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Lhx3P50481 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Lhx3P50481 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lhx3P50481 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lhx3P50481 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lhx3P50481 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.77□□□□□ -0.21
Lhx3P50481 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Lhx3P50481 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lhx3P50481 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.76□□□□□ -0.21
Lhx3P50481 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lhx3P50481 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
Lhx3P50481 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms