Protein–RNA interactions for Protein: P50404

Sftpd, Pulmonary surfactant-associated protein D, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpdP50404 Gm2423-201ENSMUST00000074863 733 ntBASIC14.37□□□□□ -0.11
SftpdP50404 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SftpdP50404 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SftpdP50404 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
SftpdP50404 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SftpdP50404 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.37□□□□□ -0.11
SftpdP50404 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SftpdP50404 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SftpdP50404 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SftpdP50404 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.37□□□□□ -0.11
SftpdP50404 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SftpdP50404 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SftpdP50404 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SftpdP50404 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.37□□□□□ -0.11
SftpdP50404 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SftpdP50404 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
SftpdP50404 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SftpdP50404 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SftpdP50404 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SftpdP50404 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SftpdP50404 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.36□□□□□ -0.11
SftpdP50404 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SftpdP50404 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SftpdP50404 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.36□□□□□ -0.11
SftpdP50404 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SftpdP50404 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SftpdP50404 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.36□□□□□ -0.11
SftpdP50404 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
SftpdP50404 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SftpdP50404 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SftpdP50404 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SftpdP50404 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SftpdP50404 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.36□□□□□ -0.11
SftpdP50404 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
SftpdP50404 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SftpdP50404 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SftpdP50404 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SftpdP50404 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SftpdP50404 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SftpdP50404 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SftpdP50404 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SftpdP50404 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SftpdP50404 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.36□□□□□ -0.11
SftpdP50404 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
SftpdP50404 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.36□□□□□ -0.11
SftpdP50404 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SftpdP50404 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SftpdP50404 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SftpdP50404 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SftpdP50404 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SftpdP50404 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SftpdP50404 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SftpdP50404 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SftpdP50404 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SftpdP50404 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
SftpdP50404 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.36□□□□□ -0.11
SftpdP50404 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SftpdP50404 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SftpdP50404 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SftpdP50404 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SftpdP50404 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SftpdP50404 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SftpdP50404 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SftpdP50404 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SftpdP50404 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SftpdP50404 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SftpdP50404 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SftpdP50404 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
SftpdP50404 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SftpdP50404 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SftpdP50404 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SftpdP50404 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
SftpdP50404 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SftpdP50404 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SftpdP50404 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SftpdP50404 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SftpdP50404 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.35□□□□□ -0.11
SftpdP50404 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SftpdP50404 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SftpdP50404 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SftpdP50404 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.35□□□□□ -0.11
SftpdP50404 Gm25925-201ENSMUST00000158314 306 ntBASIC14.35□□□□□ -0.11
SftpdP50404 Gm5354-201ENSMUST00000182417 973 ntBASIC14.35□□□□□ -0.11
SftpdP50404 Gm43094-201ENSMUST00000196549 921 ntBASIC14.35□□□□□ -0.11
SftpdP50404 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.35□□□□□ -0.11
SftpdP50404 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SftpdP50404 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
SftpdP50404 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SftpdP50404 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SftpdP50404 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SftpdP50404 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.35□□□□□ -0.11
SftpdP50404 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SftpdP50404 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SftpdP50404 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
SftpdP50404 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SftpdP50404 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SftpdP50404 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SftpdP50404 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SftpdP50404 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
SftpdP50404 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms