Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Sox2P48432 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox2P48432 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sox2P48432 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.78□□□□□ -0.36
Sox2P48432 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sox2P48432 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox2P48432 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox2P48432 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox2P48432 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox2P48432 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox2P48432 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.78□□□□□ -0.36
Sox2P48432 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox2P48432 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sox2P48432 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Sox2P48432 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Sox2P48432 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Sox2P48432 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sox2P48432 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Sox2P48432 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sox2P48432 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.77□□□□□ -0.36
Sox2P48432 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Sox2P48432 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Sox2P48432 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sox2P48432 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sox2P48432 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Sox2P48432 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sox2P48432 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Sox2P48432 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox2P48432 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.77□□□□□ -0.37
Sox2P48432 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Sox2P48432 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.77□□□□□ -0.37
Sox2P48432 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Sox2P48432 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Sox2P48432 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12.77□□□□□ -0.37
Sox2P48432 Gm17271-201ENSMUST00000165535 355 ntBASIC12.77□□□□□ -0.37
Sox2P48432 Gm18733-201ENSMUST00000173950 856 ntBASIC12.77□□□□□ -0.37
Sox2P48432 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.77□□□□□ -0.37
Sox2P48432 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.77□□□□□ -0.37
Sox2P48432 Gm37714-201ENSMUST00000194742 342 ntBASIC12.77□□□□□ -0.37
Sox2P48432 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.77□□□□□ -0.37
Sox2P48432 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.77□□□□□ -0.37
Sox2P48432 Gm18057-201ENSMUST00000208220 503 ntBASIC12.77□□□□□ -0.37
Sox2P48432 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.77□□□□□ -0.37
Sox2P48432 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Sox2P48432 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox2P48432 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox2P48432 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox2P48432 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sox2P48432 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox2P48432 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.77□□□□□ -0.37
Sox2P48432 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sox2P48432 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox2P48432 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox2P48432 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.77□□□□□ -0.37
Sox2P48432 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox2P48432 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sox2P48432 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.77□□□□□ -0.37
Sox2P48432 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Sox2P48432 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Sox2P48432 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sox2P48432 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox2P48432 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sox2P48432 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
Sox2P48432 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sox2P48432 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox2P48432 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sox2P48432 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.76□□□□□ -0.37
Sox2P48432 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.76□□□□□ -0.37
Sox2P48432 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox2P48432 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox2P48432 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sox2P48432 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.76□□□□□ -0.37
Sox2P48432 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.76□□□□□ -0.37
Sox2P48432 Mir125a-201ENSMUST00000083545 68 ntBASIC12.76□□□□□ -0.37
Sox2P48432 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Sox2P48432 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.76□□□□□ -0.37
Sox2P48432 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox2P48432 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sox2P48432 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Sox2P48432 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Sox2P48432 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox2P48432 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Sox2P48432 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sox2P48432 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Sox2P48432 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox2P48432 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sox2P48432 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Sox2P48432 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox2P48432 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox2P48432 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sox2P48432 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox2P48432 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox2P48432 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox2P48432 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox2P48432 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox2P48432 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox2P48432 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Sox2P48432 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sox2P48432 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Sox2P48432 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms