Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Sox18P43680 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox18P43680 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox18P43680 Gm43289-201ENSMUST00000200537 1475 ntBASIC13.11□□□□□ -0.31
Sox18P43680 AC113441.2-201ENSMUST00000221538 1468 ntBASIC13.11□□□□□ -0.31
Sox18P43680 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sox18P43680 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox18P43680 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Sox18P43680 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.11□□□□□ -0.31
Sox18P43680 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox18P43680 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox18P43680 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox18P43680 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox18P43680 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sox18P43680 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox18P43680 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Sox18P43680 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox18P43680 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC13.11□□□□□ -0.31
Sox18P43680 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.11□□□□□ -0.31
Sox18P43680 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sox18P43680 Gm22902-201ENSMUST00000158488 302 ntBASIC13.11□□□□□ -0.31
Sox18P43680 Gm24420-201ENSMUST00000176676 59 ntBASIC13.11□□□□□ -0.31
Sox18P43680 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Sox18P43680 Gm28975-201ENSMUST00000186412 686 ntBASIC13.11□□□□□ -0.31
Sox18P43680 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox18P43680 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox18P43680 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox18P43680 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox18P43680 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.11□□□□□ -0.31
Sox18P43680 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Sox18P43680 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.11□□□□□ -0.31
Sox18P43680 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.11□□□□□ -0.31
Sox18P43680 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox18P43680 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Sox18P43680 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox18P43680 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.11□□□□□ -0.31
Sox18P43680 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sox18P43680 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.11□□□□□ -0.31
Sox18P43680 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox18P43680 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox18P43680 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox18P43680 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox18P43680 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox18P43680 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox18P43680 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox18P43680 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox18P43680 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox18P43680 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox18P43680 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox18P43680 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sox18P43680 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox18P43680 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox18P43680 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox18P43680 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox18P43680 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox18P43680 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox18P43680 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox18P43680 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.1□□□□□ -0.31
Sox18P43680 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Sox18P43680 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox18P43680 Gm12203-201ENSMUST00000118235 598 ntBASIC13.1□□□□□ -0.31
Sox18P43680 Gm12209-201ENSMUST00000120089 596 ntBASIC13.1□□□□□ -0.31
Sox18P43680 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC13.1□□□□□ -0.31
Sox18P43680 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.1□□□□□ -0.31
Sox18P43680 Gm27341-201ENSMUST00000183570 106 ntBASIC13.1□□□□□ -0.31
Sox18P43680 Gm29396-201ENSMUST00000185659 716 ntBASIC13.1□□□□□ -0.31
Sox18P43680 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.1□□□□□ -0.31
Sox18P43680 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.1□□□□□ -0.31
Sox18P43680 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.1□□□□□ -0.31
Sox18P43680 Gm37629-201ENSMUST00000193635 1050 ntBASIC13.1□□□□□ -0.31
Sox18P43680 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox18P43680 Gm44387-201ENSMUST00000196298 145 ntBASIC13.1□□□□□ -0.31
Sox18P43680 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.1□□□□□ -0.31
Sox18P43680 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox18P43680 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.1□□□□□ -0.31
Sox18P43680 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC13.1□□□□□ -0.31
Sox18P43680 Gm18027-201ENSMUST00000218947 619 ntBASIC13.1□□□□□ -0.31
Sox18P43680 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Sox18P43680 Snora73a-201ENSMUST00000082453 205 ntBASIC13.1□□□□□ -0.31
Sox18P43680 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox18P43680 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Sox18P43680 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.1□□□□□ -0.31
Sox18P43680 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Sox18P43680 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox18P43680 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox18P43680 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox18P43680 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox18P43680 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Sox18P43680 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox18P43680 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.1□□□□□ -0.31
Sox18P43680 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC13.1□□□□□ -0.31
Sox18P43680 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox18P43680 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Sox18P43680 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox18P43680 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sox18P43680 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Sox18P43680 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox18P43680 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox18P43680 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox18P43680 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms