Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.84□□□□□ -0.35
Sox6P40645 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sox6P40645 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox6P40645 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Sox6P40645 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Sox6P40645 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Sox6P40645 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Sox6P40645 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Sox6P40645 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox6P40645 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox6P40645 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox6P40645 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Sox6P40645 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox6P40645 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox6P40645 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox6P40645 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox6P40645 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox6P40645 Gm6415-201ENSMUST00000118488 348 ntBASIC12.83□□□□□ -0.36
Sox6P40645 Gm13823-201ENSMUST00000119930 345 ntBASIC12.83□□□□□ -0.36
Sox6P40645 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.83□□□□□ -0.36
Sox6P40645 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox6P40645 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.83□□□□□ -0.36
Sox6P40645 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox6P40645 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox6P40645 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox6P40645 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox6P40645 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.83□□□□□ -0.36
Sox6P40645 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Sox6P40645 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.83□□□□□ -0.36
Sox6P40645 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox6P40645 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox6P40645 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.83□□□□□ -0.36
Sox6P40645 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox6P40645 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Sox6P40645 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Sox6P40645 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox6P40645 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox6P40645 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox6P40645 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox6P40645 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox6P40645 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.82□□□□□ -0.36
Sox6P40645 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox6P40645 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox6P40645 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox6P40645 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sox6P40645 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox6P40645 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox6P40645 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox6P40645 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox6P40645 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sox6P40645 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Sox6P40645 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox6P40645 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox6P40645 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox6P40645 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox6P40645 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.82□□□□□ -0.36
Sox6P40645 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Sox6P40645 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Sox6P40645 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox6P40645 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sox6P40645 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Sox6P40645 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox6P40645 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox6P40645 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox6P40645 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Sox6P40645 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.82□□□□□ -0.36
Sox6P40645 Gm18766-201ENSMUST00000189811 808 ntBASIC12.82□□□□□ -0.36
Sox6P40645 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox6P40645 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.82□□□□□ -0.36
Sox6P40645 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox6P40645 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox6P40645 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox6P40645 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Sox6P40645 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox6P40645 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.82□□□□□ -0.36
Sox6P40645 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sox6P40645 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox6P40645 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Sox6P40645 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sox6P40645 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sox6P40645 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox6P40645 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox6P40645 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sox6P40645 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Sox6P40645 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox6P40645 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox6P40645 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox6P40645 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox6P40645 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.81□□□□□ -0.36
Sox6P40645 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox6P40645 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox6P40645 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox6P40645 Gm13616-201ENSMUST00000120600 222 ntBASIC12.81□□□□□ -0.36
Sox6P40645 Gm9719-201ENSMUST00000162765 543 ntBASIC12.81□□□□□ -0.36
Sox6P40645 Gm22175-201ENSMUST00000175007 78 ntBASIC12.81□□□□□ -0.36
Sox6P40645 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sox6P40645 Gm29541-201ENSMUST00000191351 678 ntBASIC12.81□□□□□ -0.36
Sox6P40645 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Sox6P40645 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sox6P40645 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms