Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fen1P39749 Gm4995-201ENSMUST00000117247 432 ntBASIC13.73□□□□□ -0.21
Fen1P39749 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.73□□□□□ -0.21
Fen1P39749 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.73□□□□□ -0.21
Fen1P39749 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.73□□□□□ -0.21
Fen1P39749 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.73□□□□□ -0.21
Fen1P39749 Gm26308-201ENSMUST00000157768 69 ntBASIC13.73□□□□□ -0.21
Fen1P39749 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.73□□□□□ -0.21
Fen1P39749 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.73□□□□□ -0.21
Fen1P39749 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.73□□□□□ -0.21
Fen1P39749 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.73□□□□□ -0.21
Fen1P39749 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fen1P39749 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fen1P39749 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fen1P39749 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fen1P39749 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fen1P39749 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fen1P39749 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.73□□□□□ -0.21
Fen1P39749 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fen1P39749 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Fen1P39749 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fen1P39749 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fen1P39749 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Fen1P39749 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Fen1P39749 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.73□□□□□ -0.21
Fen1P39749 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Fen1P39749 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Fen1P39749 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.73□□□□□ -0.21
Fen1P39749 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Fen1P39749 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Fen1P39749 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.72□□□□□ -0.21
Fen1P39749 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Fen1P39749 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Fen1P39749 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Fen1P39749 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Fen1P39749 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Fen1P39749 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Fen1P39749 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Fen1P39749 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Fen1P39749 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Fen1P39749 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Fen1P39749 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Fen1P39749 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Fen1P39749 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Fen1P39749 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Fen1P39749 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.72□□□□□ -0.21
Fen1P39749 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Fen1P39749 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.72□□□□□ -0.21
Fen1P39749 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Fen1P39749 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.72□□□□□ -0.21
Fen1P39749 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.72□□□□□ -0.21
Fen1P39749 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Fen1P39749 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Fen1P39749 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Fen1P39749 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Fen1P39749 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.72□□□□□ -0.21
Fen1P39749 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Fen1P39749 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Fen1P39749 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.72□□□□□ -0.21
Fen1P39749 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Fen1P39749 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Fen1P39749 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Fen1P39749 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Fen1P39749 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Fen1P39749 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Fen1P39749 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Fen1P39749 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Fen1P39749 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Fen1P39749 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Fen1P39749 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Fen1P39749 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Fen1P39749 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Fen1P39749 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Fen1P39749 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Fen1P39749 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.71□□□□□ -0.21
Fen1P39749 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Fen1P39749 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Fen1P39749 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Fen1P39749 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Fen1P39749 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Fen1P39749 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Fen1P39749 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Fen1P39749 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.71□□□□□ -0.21
Fen1P39749 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.71□□□□□ -0.21
Fen1P39749 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.71□□□□□ -0.21
Fen1P39749 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Fen1P39749 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Fen1P39749 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Fen1P39749 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Fen1P39749 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.71□□□□□ -0.21
Fen1P39749 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Fen1P39749 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.71□□□□□ -0.21
Fen1P39749 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Fen1P39749 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.71□□□□□ -0.21
Fen1P39749 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Fen1P39749 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Fen1P39749 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Fen1P39749 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Fen1P39749 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Fen1P39749 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms