Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh4P39038 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh4P39038 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Cdh4P39038 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Cdh4P39038 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh4P39038 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh4P39038 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Cdh4P39038 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.08□□□□□ -0.32
Cdh4P39038 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh4P39038 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh4P39038 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Cdh4P39038 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Cdh4P39038 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh4P39038 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh4P39038 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh4P39038 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh4P39038 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh4P39038 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.08□□□□□ -0.32
Cdh4P39038 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh4P39038 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Cdh4P39038 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Cdh4P39038 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh4P39038 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh4P39038 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.07□□□□□ -0.32
Cdh4P39038 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh4P39038 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh4P39038 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh4P39038 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh4P39038 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh4P39038 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh4P39038 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh4P39038 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh4P39038 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.07□□□□□ -0.32
Cdh4P39038 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Cdh4P39038 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.07□□□□□ -0.32
Cdh4P39038 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.07□□□□□ -0.32
Cdh4P39038 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Cdh4P39038 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh4P39038 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.07□□□□□ -0.32
Cdh4P39038 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh4P39038 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Cdh4P39038 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh4P39038 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.07□□□□□ -0.32
Cdh4P39038 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.07□□□□□ -0.32
Cdh4P39038 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh4P39038 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh4P39038 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh4P39038 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.07□□□□□ -0.32
Cdh4P39038 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh4P39038 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh4P39038 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh4P39038 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh4P39038 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh4P39038 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.07□□□□□ -0.32
Cdh4P39038 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Cdh4P39038 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.07□□□□□ -0.32
Cdh4P39038 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh4P39038 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdh4P39038 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh4P39038 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh4P39038 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh4P39038 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Cdh4P39038 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Cdh4P39038 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.06□□□□□ -0.32
Cdh4P39038 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh4P39038 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Cdh4P39038 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh4P39038 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh4P39038 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh4P39038 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh4P39038 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh4P39038 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.06□□□□□ -0.32
Cdh4P39038 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh4P39038 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Cdh4P39038 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Cdh4P39038 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh4P39038 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh4P39038 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh4P39038 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh4P39038 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.06□□□□□ -0.32
Cdh4P39038 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.06□□□□□ -0.32
Cdh4P39038 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh4P39038 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh4P39038 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh4P39038 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.06□□□□□ -0.32
Cdh4P39038 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.06□□□□□ -0.32
Cdh4P39038 Gm37917-201ENSMUST00000194711 392 ntBASIC13.06□□□□□ -0.32
Cdh4P39038 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.06□□□□□ -0.32
Cdh4P39038 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.06□□□□□ -0.32
Cdh4P39038 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.06□□□□□ -0.32
Cdh4P39038 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh4P39038 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh4P39038 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.06□□□□□ -0.32
Cdh4P39038 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh4P39038 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.06□□□□□ -0.32
Cdh4P39038 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh4P39038 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.06□□□□□ -0.32
Cdh4P39038 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdh4P39038 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.06□□□□□ -0.32
Cdh4P39038 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms