Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
LdlrP35951 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
LdlrP35951 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
LdlrP35951 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.61□□□□□ -0.23
LdlrP35951 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LdlrP35951 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.61□□□□□ -0.23
LdlrP35951 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.61□□□□□ -0.23
LdlrP35951 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LdlrP35951 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LdlrP35951 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LdlrP35951 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LdlrP35951 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
LdlrP35951 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.61□□□□□ -0.23
LdlrP35951 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LdlrP35951 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LdlrP35951 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LdlrP35951 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
LdlrP35951 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LdlrP35951 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LdlrP35951 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.6□□□□□ -0.23
LdlrP35951 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LdlrP35951 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LdlrP35951 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LdlrP35951 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LdlrP35951 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.6□□□□□ -0.23
LdlrP35951 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.6□□□□□ -0.23
LdlrP35951 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LdlrP35951 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LdlrP35951 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LdlrP35951 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LdlrP35951 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.6□□□□□ -0.23
LdlrP35951 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LdlrP35951 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LdlrP35951 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
LdlrP35951 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LdlrP35951 Gm7730-201ENSMUST00000212486 454 ntBASIC13.6□□□□□ -0.23
LdlrP35951 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LdlrP35951 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LdlrP35951 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LdlrP35951 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LdlrP35951 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LdlrP35951 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LdlrP35951 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LdlrP35951 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.6□□□□□ -0.23
LdlrP35951 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LdlrP35951 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.6□□□□□ -0.23
LdlrP35951 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LdlrP35951 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LdlrP35951 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LdlrP35951 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
LdlrP35951 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LdlrP35951 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.59□□□□□ -0.23
LdlrP35951 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.59□□□□□ -0.23
LdlrP35951 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LdlrP35951 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
LdlrP35951 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.59□□□□□ -0.23
LdlrP35951 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.59□□□□□ -0.23
LdlrP35951 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LdlrP35951 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
LdlrP35951 Gm29541-201ENSMUST00000191351 678 ntBASIC13.59□□□□□ -0.23
LdlrP35951 Gm29741-201ENSMUST00000192667 421 ntBASIC13.59□□□□□ -0.23
LdlrP35951 AA619741-201ENSMUST00000195095 646 ntBASIC13.59□□□□□ -0.23
LdlrP35951 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LdlrP35951 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
LdlrP35951 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LdlrP35951 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LdlrP35951 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LdlrP35951 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LdlrP35951 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LdlrP35951 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LdlrP35951 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
LdlrP35951 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LdlrP35951 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
LdlrP35951 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.59□□□□□ -0.23
LdlrP35951 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
LdlrP35951 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
LdlrP35951 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LdlrP35951 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LdlrP35951 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LdlrP35951 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LdlrP35951 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LdlrP35951 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.58□□□□□ -0.23
LdlrP35951 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LdlrP35951 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
LdlrP35951 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LdlrP35951 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
LdlrP35951 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.58□□□□□ -0.24
LdlrP35951 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
LdlrP35951 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
LdlrP35951 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
LdlrP35951 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
LdlrP35951 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LdlrP35951 Gm8410-201ENSMUST00000117225 605 ntBASIC13.58□□□□□ -0.24
LdlrP35951 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LdlrP35951 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
LdlrP35951 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
LdlrP35951 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.58□□□□□ -0.24
LdlrP35951 Gm28630-201ENSMUST00000187806 498 ntBASIC13.58□□□□□ -0.24
LdlrP35951 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LdlrP35951 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms