Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox5P35710 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sox5P35710 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Sox5P35710 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox5P35710 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox5P35710 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox5P35710 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sox5P35710 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.91□□□□□ -0.02
Sox5P35710 Gm21470-201ENSMUST00000187680 696 ntBASIC14.91□□□□□ -0.02
Sox5P35710 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sox5P35710 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sox5P35710 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.91□□□□□ -0.02
Sox5P35710 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox5P35710 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox5P35710 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.91□□□□□ -0.02
Sox5P35710 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox5P35710 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox5P35710 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox5P35710 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox5P35710 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.91□□□□□ -0.02
Sox5P35710 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox5P35710 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox5P35710 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox5P35710 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Sox5P35710 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox5P35710 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox5P35710 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Sox5P35710 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sox5P35710 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sox5P35710 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox5P35710 Gm10176-201ENSMUST00000159707 2264 ntBASIC14.9□□□□□ -0.02
Sox5P35710 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox5P35710 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.9□□□□□ -0.02
Sox5P35710 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox5P35710 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.9□□□□□ -0.02
Sox5P35710 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
Sox5P35710 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox5P35710 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.9□□□□□ -0.02
Sox5P35710 Mir1897-201ENSMUST00000122581 272 ntBASIC14.9□□□□□ -0.02
Sox5P35710 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox5P35710 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox5P35710 Gm8927-201ENSMUST00000181978 981 ntBASIC14.9□□□□□ -0.02
Sox5P35710 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.9□□□□□ -0.02
Sox5P35710 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sox5P35710 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.9□□□□□ -0.02
Sox5P35710 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.9□□□□□ -0.02
Sox5P35710 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Sox5P35710 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sox5P35710 Gm3222-201ENSMUST00000071282 990 ntBASIC14.9□□□□□ -0.02
Sox5P35710 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Sox5P35710 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox5P35710 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sox5P35710 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.9□□□□□ -0.02
Sox5P35710 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox5P35710 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sox5P35710 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sox5P35710 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox5P35710 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sox5P35710 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sox5P35710 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox5P35710 Syt7-205ENSMUST00000224135 1557 ntBASIC14.9□□□□□ -0.02
Sox5P35710 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC14.9□□□□□ -0.02
Sox5P35710 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sox5P35710 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox5P35710 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox5P35710 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox5P35710 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.89□□□□□ -0.03
Sox5P35710 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Sox5P35710 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Sox5P35710 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Sox5P35710 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Sox5P35710 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sox5P35710 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sox5P35710 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sox5P35710 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.89□□□□□ -0.03
Sox5P35710 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.89□□□□□ -0.03
Sox5P35710 Gm28630-201ENSMUST00000187806 498 ntBASIC14.89□□□□□ -0.03
Sox5P35710 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.89□□□□□ -0.03
Sox5P35710 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox5P35710 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox5P35710 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox5P35710 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox5P35710 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Sox5P35710 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.89□□□□□ -0.03
Sox5P35710 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sox5P35710 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox5P35710 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox5P35710 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Sox5P35710 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sox5P35710 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.89□□□□□ -0.03
Sox5P35710 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox5P35710 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox5P35710 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox5P35710 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.89□□□□□ -0.03
Sox5P35710 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox5P35710 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox5P35710 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox5P35710 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox5P35710 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Sox5P35710 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms