Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp13P33435 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.99□□□□□ -0.17
Mmp13P33435 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Mmp13P33435 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp13P33435 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp13P33435 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp13P33435 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp13P33435 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.99□□□□□ -0.17
Mmp13P33435 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Mmp13P33435 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.99□□□□□ -0.17
Mmp13P33435 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp13P33435 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.99□□□□□ -0.17
Mmp13P33435 Gm27631-201ENSMUST00000184163 466 ntBASIC13.99□□□□□ -0.17
Mmp13P33435 AA619741-201ENSMUST00000195095 646 ntBASIC13.99□□□□□ -0.17
Mmp13P33435 Gm44344-201ENSMUST00000200287 129 ntBASIC13.99□□□□□ -0.17
Mmp13P33435 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.99□□□□□ -0.17
Mmp13P33435 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp13P33435 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Mmp13P33435 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp13P33435 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp13P33435 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp13P33435 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp13P33435 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp13P33435 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp13P33435 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp13P33435 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp13P33435 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp13P33435 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp13P33435 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp13P33435 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp13P33435 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp13P33435 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp13P33435 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Mmp13P33435 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp13P33435 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp13P33435 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp13P33435 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp13P33435 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp13P33435 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Mmp13P33435 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp13P33435 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp13P33435 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp13P33435 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp13P33435 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp13P33435 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.98□□□□□ -0.17
Mmp13P33435 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp13P33435 Mir1897-201ENSMUST00000122581 272 ntBASIC13.98□□□□□ -0.17
Mmp13P33435 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.98□□□□□ -0.17
Mmp13P33435 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.98□□□□□ -0.17
Mmp13P33435 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp13P33435 Gm45453-201ENSMUST00000211758 853 ntBASIC13.98□□□□□ -0.17
Mmp13P33435 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp13P33435 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Mmp13P33435 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp13P33435 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp13P33435 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp13P33435 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.98□□□□□ -0.17
Mmp13P33435 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp13P33435 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp13P33435 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp13P33435 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Mmp13P33435 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp13P33435 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp13P33435 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp13P33435 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp13P33435 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp13P33435 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp13P33435 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp13P33435 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp13P33435 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.97□□□□□ -0.17
Mmp13P33435 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp13P33435 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp13P33435 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp13P33435 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp13P33435 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp13P33435 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Mmp13P33435 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Mmp13P33435 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp13P33435 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.97□□□□□ -0.17
Mmp13P33435 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp13P33435 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp13P33435 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp13P33435 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp13P33435 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp13P33435 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.97□□□□□ -0.17
Mmp13P33435 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp13P33435 Gm29741-201ENSMUST00000192667 421 ntBASIC13.97□□□□□ -0.17
Mmp13P33435 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp13P33435 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.97□□□□□ -0.17
Mmp13P33435 Dupd1-202ENSMUST00000224735 548 ntBASIC13.97□□□□□ -0.17
Mmp13P33435 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp13P33435 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp13P33435 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp13P33435 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp13P33435 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp13P33435 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp13P33435 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp13P33435 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp13P33435 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp13P33435 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms