Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a1P31648 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Slc6a1P31648 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a1P31648 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a1P31648 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a1P31648 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a1P31648 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a1P31648 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a1P31648 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Slc6a1P31648 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a1P31648 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.74□□□□□ -0.53
Slc6a1P31648 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a1P31648 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC11.74□□□□□ -0.53
Slc6a1P31648 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Slc6a1P31648 Mir1895-201ENSMUST00000122615 79 ntBASIC11.74□□□□□ -0.53
Slc6a1P31648 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a1P31648 Gm2445-201ENSMUST00000182798 989 ntBASIC11.74□□□□□ -0.53
Slc6a1P31648 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC11.74□□□□□ -0.53
Slc6a1P31648 Gm43575-201ENSMUST00000196420 516 ntBASIC11.74□□□□□ -0.53
Slc6a1P31648 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a1P31648 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Slc6a1P31648 AC147366.1-201ENSMUST00000227671 852 ntBASIC11.74□□□□□ -0.53
Slc6a1P31648 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Slc6a1P31648 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a1P31648 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a1P31648 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Slc6a1P31648 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.74□□□□□ -0.53
Slc6a1P31648 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Slc6a1P31648 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a1P31648 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a1P31648 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a1P31648 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.74□□□□□ -0.53
Slc6a1P31648 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a1P31648 Paupar-201ENSMUST00000194826 3482 ntBASIC11.74□□□□□ -0.53
Slc6a1P31648 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a1P31648 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a1P31648 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a1P31648 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Slc6a1P31648 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Slc6a1P31648 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a1P31648 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.74□□□□□ -0.53
Slc6a1P31648 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.74□□□□□ -0.53
Slc6a1P31648 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a1P31648 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a1P31648 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.74□□□□□ -0.53
Slc6a1P31648 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a1P31648 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a1P31648 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Slc6a1P31648 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a1P31648 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a1P31648 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a1P31648 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a1P31648 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a1P31648 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a1P31648 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a1P31648 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a1P31648 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a1P31648 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a1P31648 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Slc6a1P31648 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Slc6a1P31648 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a1P31648 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC11.73□□□□□ -0.53
Slc6a1P31648 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a1P31648 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a1P31648 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a1P31648 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a1P31648 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a1P31648 Gm14822-201ENSMUST00000122247 291 ntBASIC11.73□□□□□ -0.53
Slc6a1P31648 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a1P31648 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Slc6a1P31648 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a1P31648 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a1P31648 Gm26308-201ENSMUST00000157768 69 ntBASIC11.73□□□□□ -0.53
Slc6a1P31648 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a1P31648 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.73□□□□□ -0.53
Slc6a1P31648 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a1P31648 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Slc6a1P31648 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.73□□□□□ -0.53
Slc6a1P31648 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.73□□□□□ -0.53
Slc6a1P31648 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.73□□□□□ -0.53
Slc6a1P31648 Gm37230-201ENSMUST00000194491 818 ntBASIC11.73□□□□□ -0.53
Slc6a1P31648 Gm2272-201ENSMUST00000194903 582 ntBASIC11.73□□□□□ -0.53
Slc6a1P31648 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a1P31648 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a1P31648 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a1P31648 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a1P31648 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC11.73□□□□□ -0.53
Slc6a1P31648 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a1P31648 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.73□□□□□ -0.53
Slc6a1P31648 AC119177.1-201ENSMUST00000227647 1332 ntBASIC11.73□□□□□ -0.53
Slc6a1P31648 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a1P31648 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a1P31648 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a1P31648 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a1P31648 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Slc6a1P31648 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a1P31648 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a1P31648 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Slc6a1P31648 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc6a1P31648 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms